Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1141 ATGGCCGACGCTGGCGGTGACGACAATGGCGTTTTCCATCTTCACGGGGACCTCGACTTGAAAATTATCGAGGCTCGCCGGTTACCAAACATGGATATCTTTTCCGAGCGTCTTCGCCGCTGCGTAACCGCCTGCGATACCATCAAATTTCACTCCTCCGACGCCGCCGCTGATGGAAGCGTCGGCCGAACGCACGAGCACCGGAAGATTATCACCAGCGACCCGTACGTCACCGTTTCCGTGCCGCAAGCCACGGTGGCTCGCACGCGCGTGTTAAAAAACTCGCAGAAGCCGGTGTGGAACGAGAGCTTCCACATCCCGCTGGCGCATCCCGTCGTCGATTTGGAATTTCGCATCAAGGACGACGACGTTTTTGGCGCGCAGACCATGGGGACTGTTAAGATTCCAGCGAAGAGGATTGCCACCGGCGAGTTGATCTCTGGCTGGTTTCCGATAATAGGGTCCTCCGGGAAGCCGCCGAAGCCGGACACCGCGCTTCACATCGAGATGAAGTTCACGCCGGTGGAGGAGAATCCGCTGTACCGGGCAGGCATTGCAGCGGACCCTGAGCACAGGGGCGTGAGGAACACGTATTTTCCGGTGAGGAAGGGAAGTTCAGTGAGATTGTATCAAGATGCACAGTGTCCTGATATGACGGTACCGGAGATTAAGCTTGATGGTGGCAAAATTTATAGGCACGGGAAGTGTTGGGAAGATATCTGTTATGCTATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCAATTTACCACAAGGTGAAGCTTGTGAGAGAGCCAACTAGGCCATTGCCACGAGGTGGAGATTTGACACTTGGTGAGTTGCTTAAGTACAAGTCTGAAGAAGGGGTGAGAGTTCTTTTGTTGGTTTGGGATGATAAGACTTCACATGATAAGGTCTTCTTCAAGACGTCTGGTGTGATGCAGACTCATGATGAGGAAACGAGGAAGTTTTTTAAGCACTCTTCTGTGATGTGTGTTTTGGCACCTCGGTATGCTAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGGACCGTCTTCACACACCACCAAAAATGTGTGATTGTGGACACACAGGCTGCTGGTAATAACCGAAAAATAACTGCTTTTATAGGAGGTCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATCGACTTTTTCGTGATCTTGACACTGTATTTGCTGGTGATTTCCACAATCCTACATTTCCTACTGGAACAAGGGCTCCTAGACAACCTTGGCATGACTTGCACTGCAGAATAGATGGACCTGCTGCATATGACGTTCTGATTAATTTTGAGCAGCGATGGAGAAAATCAACTAAGTGGAAAGAGTTTGCAATCCTTTTCAAAAAATCCTCTCATTGGCATGATGATGCTTTGTTAAGAATAGAACGCATCTCATGGATATTAAGTCCTTTCCATCCTACCTCAAAGGAAAATTATACAGTTGTTCCAGGGGATGACCCCTTAGTATATGTTTCTAGTGAAGAAGATCCTGAAAACTGGCATGTTCAGATCTTTCGCTCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAACATGTTGATGTTGCTATATCCCAGAATCTTATCTGTTCTAAAAATTTGGTTATAGACAAAAGCATTCAAACAGGTTACATTCAAGCAATCAGATCTGCTCAACACTTTATTTATATCGAAAACCAATACTTTATTGGATCATCATATGCGTGGCCATCTTATAAAGATGCAGGGGCTGATAATCTAATCCCAATGGAATTGGCACTCAAAATTGCTGATAAAATCAGAGCCAGGGAGAGATTTGCTGTTTATATTGTTTTACCAATGTGGCCAGAAGGAGATCCTAAAACTGGAGCCATGCAAGAAATCCTCTTTTGGCAGGGCCAGACAATGCAAATGATGTATGATGTTGTTGCTAGAGAATTGAAATCAATGCAACTTACTGACGTGCACCCCCAAGGTTACCTCAATTTCTATTGCCTTGGTAATCGGGAAAATGTTAATGAAGAAAGCTCAGGCTCAAATGGTGCACAGGTCTCAGGAGCATATAAATATCGCCGATTTATGATTTATGTGCATGCTAAGGGGATGATAGTTGACGATGAGTATGTTATAGTGGGATCTGCTAATATAAACCAAAGATCTATGGCTGGTACGAAAGATACCGAGATAGCTATGGGTTCATATCAACCCCATTATACATGGTCCGCGAGGAAAAGACATCCACGTGGCCAGATATATGGTTACAGAATGTCGCTTTGGGGAGAGCATCTTGGCATGTTAGATGAAACTTTTGAGGAACCAGAGAGATTGGAGTGTGTGCGTAAAGTGAATGAAATTGCAGAGAATAACTGGAAATCATTCGCTTCTGAAGATTTCTCACTTCTGCAGGGACATCTTCTTAAATATCCTGTACAGGTAGATTCTGATGGGAAGGTTAGCTCCCTAAGTGAATGTGAGAGTTTCCCAGATGCCGGGGGTAAGATTTTGGGGAGTCACTCCACAACAATTCCTGATATCCTAACAACTTAA 2571 0.4566 MADAGGDDNGVFHLHGDLDLKIIEARRLPNMDIFSERLRRCVTACDTIKFHSSDAAADGSVGRTHEHRKIITSDPYVTVSVPQATVARTRVLKNSQKPVWNESFHIPLAHPVVDLEFRIKDDDVFGAQTMGTVKIPAKRIATGELISGWFPIIGSSGKPPKPDTALHIEMKFTPVEENPLYRAGIAADPEHRGVRNTYFPVRKGSSVRLYQDAQCPDMTVPEIKLDGGKIYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFFKTSGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFAGDFHNPTFPTGTRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKSTKWKEFAILFKKSSHWHDDALLRIERISWILSPFHPTSKENYTVVPGDDPLVYVSSEEDPENWHVQIFRSIDSGSLKGFPKHVDVAISQNLICSKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIADKIRARERFAVYIVLPMWPEGDPKTGAMQEILFWQGQTMQMMYDVVARELKSMQLTDVHPQGYLNFYCLGNRENVNEESSGSNGAQVSGAYKYRRFMIYVHAKGMIVDDEYVIVGSANINQRSMAGTKDTEIAMGSYQPHYTWSARKRHPRGQIYGYRMSLWGEHLGMLDETFEEPERLECVRKVNEIAENNWKSFASEDFSLLQGHLLKYPVQVDSDGKVSSLSECESFPDAGGKILGSHSTTIPDILTT* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1141 856 Gene3D Endonuclease Chain A 524 747 - -
Apr7g1141 856 Gene3D Endonuclease Chain A 226 473 - -
Apr7g1141 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 14 175 IPR035892 -
Apr7g1141 856 PANTHER PHOSPHOLIPASE D 11 856 IPR015679 -
Apr7g1141 856 Pfam Phospholipase D C terminal 775 845 IPR024632 -
Apr7g1141 856 ProSiteProfiles C2 domain profile. 1 150 IPR000008 -
Apr7g1141 856 SMART C2_3c 17 149 IPR000008 -
Apr7g1141 856 PIRSF PLD_plant 5 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr7g1141 856 PANTHER PHOSPHOLIPASE D DELTA 11 856 - -
Apr7g1141 856 Pfam PLD-like domain 560 737 IPR025202 -
Apr7g1141 856 Gene3D C2 domain 15 181 IPR035892 -
Apr7g1141 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 355 390 IPR001736 GO:0003824
Apr7g1141 856 SUPERFAMILY Phospholipase D/nuclease 553 781 - -
Apr7g1141 856 SMART pld_4 701 728 IPR001736 GO:0003824
Apr7g1141 856 SMART pld_4 355 390 IPR001736 GO:0003824
Apr7g1141 856 Pfam C2 domain 16 152 IPR000008 -
Apr7g1141 856 Pfam Phospholipase D Active site motif 355 390 IPR001736 GO:0003824
Apr7g1141 856 SUPERFAMILY Phospholipase D/nuclease 197 465 - -
Apr7g1141 856 CDD C2_plant_PLD 10 173 - -
Apr7g1141 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 701 728 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1141 Apr-Chr7 18379759 18386814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1141 1 692 Phospholipase D Gene Family (Wang group) AT4G35790 71.203 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1141 K01115 - gmx:100814486 1565.82