Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0880 ATGCCACGACAACACTCTCCTTCATTCCTTCTCTGTCAAGAACAATACCCTTTCCAACAACATTCTCCCACCAACCATCACTCTTCACCTCTCACTTTGTTCCACAATGATTCCTTCTTCCAACACCATCACCTTCTCTCTCTTTTAGCCAAAGAGAGACCCACCCATTTTCGTTCTCATACCGATGCCACTCTCTCTCCTCGTCAAGATGCCGTTCGCTGGATTTTTAGAGTTTCCTCTCTTTATGCTTTCACTGCCTTGACCACTGTTCTTGCCGTTAACTACTTTGATAGGTCCGTTACCAGCGTAAGGTTTCAGAGTGATAAGCCATGGATGGCTCAGCTCGTTGCTGTTGCTTGTTTGTCTCTCGCTGCCAAAATGGAAGAGACACAAGTGCCACTTCTTTTGGACCTGCAAGTGGAGGAATCGAAGTTCGTGTTTGAACCAAAGACCATACAGAGAATGGAGCTTCTAGTGTTGTCCACTCTTAAATGGAAGATGAACCCTGTGACCCCAATTTCCTTCTTCCAACATCTTGTTACAAGGCTTGGTTTAAAGAGTCACTTGCATTGGGAGTTCCTCTGTAGGTGTGAACGCGTTCTTCTCTCAGTCATTGCTGATTCAAGGGTTATGAGTTATCTTCCTTCTACTTTGGCTGCTGCTACGATGATCCACGTTATTGAAGAGATTGAATCATTTAATGCATTGGAATGTAGAAATCAAGTTCTTGGTTTACTCAATAGTAGTGAGGAACAAGTGAATGAGTGCTACAAATTGATGCTGAAGAAGTTAGTTTGTTGTGAAGGCATTCACAATCTTTGCCAGAAGCGCAAACGCCTGTCTGAACCAAGTAGCCCAGGTGGAGTCATTGATGCATCTTTCAGCTGTGAGAGCTCAAATGATTCATGGGCTGTGGCATCATCAGTGACACTTTCACTGGAGCCAGTGTTCAAGAAGAGCAAAGTTCAAGAACAGCAGATGCGGTTGCCTTTAGTAAATCACGTGTCTGTTGATGTTCTAAGTAGTCCTCGTTAA 1035 0.4406 MPRQHSPSFLLCQEQYPFQQHSPTNHHSSPLTLFHNDSFFQHHHLLSLLAKERPTHFRSHTDATLSPRQDAVRWIFRVSSLYAFTALTTVLAVNYFDRSVTSVRFQSDKPWMAQLVAVACLSLAAKMEETQVPLLLDLQVEESKFVFEPKTIQRMELLVLSTLKWKMNPVTPISFFQHLVTRLGLKSHLHWEFLCRCERVLLSVIADSRVMSYLPSTLAAATMIHVIEEIESFNALECRNQVLGLLNSSEEQVNECYKLMLKKLVCCEGIHNLCQKRKRLSEPSSPGGVIDASFSCESSNDSWAVASSVTLSLEPVFKKSKVQEQQMRLPLVNHVSVDVLSSPR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0880 344 Pfam Cyclin, C-terminal domain 170 264 IPR004367 -
Apr7g0880 344 CDD CYCLIN 68 160 IPR013763 -
Apr7g0880 344 Gene3D - 56 168 - -
Apr7g0880 344 SUPERFAMILY Cyclin-like 152 265 IPR036915 -
Apr7g0880 344 SMART Cyclin_C_2 170 298 IPR004367 -
Apr7g0880 344 SMART cyclin_7 73 161 IPR013763 -
Apr7g0880 344 PANTHER CYCLINS 21 327 IPR039361 -
Apr7g0880 344 Pfam Cyclin, N-terminal domain 49 168 IPR006671 -
Apr7g0880 344 PANTHER CYCLIN-D3-2 21 327 - -
Apr7g0880 344 Gene3D - 169 258 - -
Apr7g0880 344 SUPERFAMILY Cyclin-like 41 168 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0880 Apr-Chr7 15824362 15826139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0880 39 334 Core Cell Cycle Gene Families AT5G67260 51.634 1.90e-96 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0108 3 1892063 1893896 Apr7g0880 7 15824362 15826139 ECH
Apr9g0393 9 5412460 5428171 Apr7g0880 7 15824362 15826139 ECH
Apr5g1494 5 18901001 18902810 Apr7g0880 7 15824362 15826139 ECH
Apr7g0880 7 15824362 15826139 Apr7g0880 7 15824362 15826139 ECH
Apr7g0880 7 15824362 15826139 Apr8g2468 8 34690746 34692531 PCT
Apr3g0108 3 1892063 1893896 Apr7g0880 7 15824362 15826139 PCT