Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0155 ATGACCAACCCCAATAATATTTTTCACAACCTCGTGAAGCTCTTCAAATTTGGATCCAGAAAAGAGGAACATGCTGACAACGACATAGAGAACATAGTTGCACATGAGCACAAGATATTCTCCTACGAAACATTGATCGCTGCTACTAAGAATTTTTACATTCTTAACAAGCTAGGTGAGGGGGGATTTGGACCCGTCTACAAGGGGAAATTGAATGATGGGAGAGAGATTGCGGTGAAGAGGTTATCGCAAAGATCAAATCAGCAGAAGACGCAGTTCATTAACGAGGCCAAGTTGTTGGGTCGTGTTCAGCACCGTAATGTGGTGAATTTGTATGGTTATTGTATCCATGGGTCTGAGAAGCTTCTTGTATACGAGTATGTCCCTCGCCAGAGTCTTGACAAGCTTCTTTTCAGATCAGACAAGAGAGCAGTGCTTGATTGGAAACGTGGATTTGAGATAATGAGTGGGGTGGGAAGAGGGTTGCTTTATCTCCACGAAGACGCGCCCAATTGCATAACCCATCGTGACATAAAGGCCAGTAACATCTTACTTGACCAAAACTGGGTCCCAAAGATCGCTGATTTTGGCCTCGCACGCCTTTTTCCCCAACACCAAACCCATGGCTTTACACGTGTGGCTGGAACCAACGGCTATATGGCTCCCGAGTATTTGATGCATGGACATCTGTCTGTGAAGGCTGACGTATTTAGCTATGGGGTTTTCGTGTTGGAGTTTATCACCGGCCACCGAAATTCCTCGTTTCATTTGGACGTCCATGCACTCGATCTCCTAGACTTGGCATACAACCAATACAAGAAAGGGAGGGCCTTAGAAATAGTGGACCCTATAATGGCATCTACAGTGGTGACTGAACAAGTAGAAAGGTGTATTAAATTGGGTCTACTCTGCACTCAAGGTGATCCTCAATTGCGTCCAACAATGGGGCGTGTGGTGATGATGTTGTCGAAGAAACAAGGCTATATGGACGAACCAACAAGACCAAGAATACCCAGTTCTAGATACAAAAGAAGTGTACCTCGTAGTCATGGGACTTTTGAAATGTCTTCTACTATTGGAACTTCTGCTTACGATATTGATGACTCTGACTCATACACTTCTTATTTAAGCAATTATGGCACAAATATTACTTCTCCAACAGCATCAAGCTCCGGTACTGCGGAAATTGACCGACGAGGGAAACGACCAATGCAGGGGTAG 1221 0.4464 MTNPNNIFHNLVKLFKFGSRKEEHADNDIENIVAHEHKIFSYETLIAATKNFYILNKLGEGGFGPVYKGKLNDGREIAVKRLSQRSNQQKTQFINEAKLLGRVQHRNVVNLYGYCIHGSEKLLVYEYVPRQSLDKLLFRSDKRAVLDWKRGFEIMSGVGRGLLYLHEDAPNCITHRDIKASNILLDQNWVPKIADFGLARLFPQHQTHGFTRVAGTNGYMAPEYLMHGHLSVKADVFSYGVFVLEFITGHRNSSFHLDVHALDLLDLAYNQYKKGRALEIVDPIMASTVVTEQVERCIKLGLLCTQGDPQLRPTMGRVVMMLSKKQGYMDEPTRPRIPSSRYKRSVPRSHGTFEMSSTIGTSAYDIDDSDSYTSYLSNYGTNITSPTASSSGTAEIDRRGKRPMQG* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0155 406 MobiDBLite consensus disorder prediction 329 354 - -
Apr7g0155 406 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 369 - -
Apr7g0155 406 Gene3D Phosphorylase Kinase; domain 1 10 127 - -
Apr7g0155 406 PANTHER RECEPTOR-LIKE KINASE 3 369 - -
Apr7g0155 406 CDD STKc_IRAK 58 324 - -
Apr7g0155 406 SMART serkin_6 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0155 406 MobiDBLite consensus disorder prediction 383 406 - -
Apr7g0155 406 SUPERFAMILY Protein kinase-like (PK-like) 36 357 IPR011009 -
Apr7g0155 406 Pfam Protein kinase domain 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0155 406 Gene3D Transferase(Phosphotransferase) domain 1 128 334 - -
Apr7g0155 406 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0155 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0155 Apr-Chr7 5140286 5161651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0155 11 338 Receptor kinase-like Gene Family AT4G23230 45.946 9.64e-99 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g0155 Pkinase 3.6e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0155 7 5140286 5161651 Apr7g0155 7 5140286 5161651 ECH