Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0153 ATGAGTATGGGTACCCTTCAAAGTTGGAGAAAAGCCTACGGCGCCCTCAAAGACACCACCAAAGTGGGTCTCGCTCATGTCAACAGCGATTATGCGGATTTGGACGTTGCCGTAGTCAAAGCCACCAACCACGTCGAATGTCCTCCCAAGGAGAGACACCTTAGAAAAATTCTGTTTGCAACTTCTGCTGTACGGCCTAGAGCGGATGTTGCTTACTGCATTCATGCACTTGCACGTCGATTGGCGAAGACGCGAAACTGGACGGATCGGAGTTCAGGGAGGATGATTAGCACCGAATGTGAGTCTCATGGTCTCTACCATTTAAATGCTTCTGCTCATGCTGGTTTGGTGGCGTTGAAAACATTGATAGTCATTCATAGGTTATTGAGGGAGGGTGATCCTACTTTTAGGGAAGAACTTCTTAATTTCTCACTGAGAGGGCGCATACTCCAACTTTCTAATTTCAAAGATGATTCAAGCGCAATAGCCTGGGATTGTTCTGCCTGGGTACGTACTTATGCATTATATTTGGAAGAAAGACTTGAATGTTTCCGGATTCTGAAGTATGATATTGAAGCTGAGCGTCTACCTAAGCCTGTTCCAGGGCAGGACAAGGGGTACAGCAGGACCAGTGATTTAAATAGTGAGGAGCTATTGGAACAACTGCCTGCTTTGCAGCAGCTGCTCTATCGTCTTGTTGGTTGTCGGCCAGAAGGAGCAGCTTTTAGCAACTTTGTGATACAATATGCCCTGGCTCTGGTTCTAAAAGAGAGCTTTAAAGTTTATTGTGCTATTAATGACGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGCCCAGACATGAAGCTATAAAAGCTCTTGATGTCTATAAACGTGCAGGTCAGCAGGCGGGAAGTCTCTCTGATTTCTTTCAAATATGCAAAGGGTTGGAACTTGCTAGGAATTTTCAGTTTCCTGTTTTAAGAGAGCCTCCACAATCTTTTCTCATAACCATGGAAGACTACATAAAGGAGGCACCACGAGTGGTTACAGTTCCAAGTGAGCCATTGTTGCAGTTGACTTACAGACCGGAAGAAGATGTTCCCACAATCGAAGACATAAAATTATCTGAAGAACAGGAGCCATCAGTTGCTGTTGATGATGATGTTATCTCAAATTCTGAACCTGCTCCTCTTCCTGCACCATCTCACAATTTTGAAACTAGAGACTTACTGGGGTTGAATGACAGTACATCTAATGCGTCATTGATTGAAGAAAGAAATGCCCTTGCCCTAGCCATAGTCCCCACCGAAATTGGCACTACATCAGCTTTTGATTCTAGTGCTGTCCAGACCAAAGATTTTGATCCAACCGGTTGGGAGCTTGCGCTGGTCTCCACTCCAAGTGCCAACATTTCGGCAGTCAATGAGAGACAATTGGCTGGTGGATTGGATTCTCTCACGCTAAACAGCTTATACGATGAAGGAGCATATAGATCTGCACAGCAACCAGTATATGGAGTACCAGCCCCAAATCCATTTGAAGTGCAGGATCCATTTGCTATATCAAGTAGCATCCCTCCCCCACAACACTTACAAATGGCAGCAATGGCTCAACCGCAAGTTAATCCATTCGGTCCATACCAACCATATCAGCCACAACAGCAGCACATGTTCATGAACCCAACAAATCCCTTCGGGGATACAGGATTCGGGGCGTTTCCTGTGAATCCCATTTCACACCCACATAATAACAATCCATTTGGAAGCAATGGCTTGTTATAG 1767 0.4482 MSMGTLQSWRKAYGALKDTTKVGLAHVNSDYADLDVAVVKATNHVECPPKERHLRKILFATSAVRPRADVAYCIHALARRLAKTRNWTDRSSGRMISTECESHGLYHLNASAHAGLVALKTLIVIHRLLREGDPTFREELLNFSLRGRILQLSNFKDDSSAIAWDCSAWVRTYALYLEERLECFRILKYDIEAERLPKPVPGQDKGYSRTSDLNSEELLEQLPALQQLLYRLVGCRPEGAAFSNFVIQYALALVLKESFKVYCAINDGIINLVDKFFEMPRHEAIKALDVYKRAGQQAGSLSDFFQICKGLELARNFQFPVLREPPQSFLITMEDYIKEAPRVVTVPSEPLLQLTYRPEEDVPTIEDIKLSEEQEPSVAVDDDVISNSEPAPLPAPSHNFETRDLLGLNDSTSNASLIEERNALALAIVPTEIGTTSAFDSSAVQTKDFDPTGWELALVSTPSANISAVNERQLAGGLDSLTLNSLYDEGAYRSAQQPVYGVPAPNPFEVQDPFAISSSIPPPQHLQMAAMAQPQVNPFGPYQPYQPQQQHMFMNPTNPFGDTGFGAFPVNPISHPHNNNPFGSNGLL* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0153 588 CDD ANTH_N 34 184 - -
Apr7g0153 588 Pfam ANTH domain 33 88 IPR011417 GO:0005543
Apr7g0153 588 Pfam ANTH domain 114 339 IPR011417 GO:0005543
Apr7g0153 588 SMART enth_2 32 191 IPR013809 -
Apr7g0153 588 PANTHER OS05G0549000 PROTEIN 3 88 - -
Apr7g0153 588 PANTHER OS05G0549000 PROTEIN 111 571 - -
Apr7g0153 588 Gene3D - 9 191 IPR008942 -
Apr7g0153 588 SUPERFAMILY ENTH/VHS domain 33 191 IPR008942 -
Apr7g0153 588 PANTHER CLATHRIN ASSEMBLY PROTEIN 3 88 IPR045192 GO:0048268|GO:0072583
Apr7g0153 588 PANTHER CLATHRIN ASSEMBLY PROTEIN 111 571 IPR045192 GO:0048268|GO:0072583
Apr7g0153 588 ProSiteProfiles ENTH domain profile. 26 191 IPR013809 -
Apr7g0153 588 SUPERFAMILY GAT-like domain 209 339 - -
Apr7g0153 588 Gene3D ANTH domain 203 353 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0153 Apr-Chr7 5100493 5121084 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0153 7 5100493 5121084 Apr7g0153 7 5100493 5121084 ECH