Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0125 ATGGACAGTTGTATTCTGGGTCTCCTCAAACTTCGACTTAAAAGAGGTATTAATCTCGCAATTCGCGATGCTCGCGCCACCAGCGACCCTTATGTCATTGTCAACGTGGCCGAACAGAAGCTGAAGACTCGTGTCATGAAAAACAACTGCAATCCTGAGTGGGATGAAGAACTGACCCTTTCTATAAAGGATGTTAACACCCCAATACATCTGACGGTTTATGACAAAGACACATTCACTGTGGATGACAAAATGGGTGAGGCAGATATAGACTTAAAACCATATCTTCAATGTTTTCAAGTGGGTTTGAACAATCTCCCGAATGGTTCCATAGTGAAGAGGATTCAACCAAATAGGACTAATTGCCTTGCTGAAGAGAGCATTTGCGTTTGGCAAAATGGAAATATCATCCAAGAAATGATTTTGAGATTGAGAAATGTGGAGCGTGGCGAGCTGGTTGCGGAAATTGAGTGGATTGATGTTCTTGGTTGCAAAGGCTTATCAGGGATAGAAATTTAA 519 0.42 MDSCILGLLKLRLKRGINLAIRDARATSDPYVIVNVAEQKLKTRVMKNNCNPEWDEELTLSIKDVNTPIHLTVYDKDTFTVDDKMGEADIDLKPYLQCFQVGLNNLPNGSIVKRIQPNRTNCLAEESICVWQNGNIIQEMILRLRNVERGELVAEIEWIDVLGCKGLSGIEI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0125 172 Pfam C2 domain 8 94 IPR000008 -
Apr7g0125 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Apr7g0125 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 102 IPR035892 -
Apr7g0125 172 SMART C2_3c 8 104 IPR000008 -
Apr7g0125 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 5 165 - -
Apr7g0125 172 Gene3D C2 domain 6 162 IPR035892 -
Apr7g0125 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 165 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0125 Apr-Chr7 4521331 4522937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0125 40 168 C2H2 Transcription Factor Family AT1G70790 64.122 1.91e-56 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0125 7 4521331 4522937 Apr7g0125 7 4521331 4522937 ECH
Apr7g0125 7 4521331 4522937 Apr6g0995 6 14594883 14597076 ECH