Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0230 ATGGAGGGGATGAAGAGGGTGCTATCACCACCCATGTTGCTTCTCTTTCTTGGCTTCATTGTGCTTATCATGTTGCCACAAACCTCCGCTACAAGGTGGACTGTTGGAGGCAGCAATTTTTGGAACACCAATTTTAACTACACTACTTGGGTTAAAGACAAACATTTCTACATTGGTGATTGGCTTTATTTTGTGTACGATAGGAACCAAATGAATGTGCTTGAAGTGAACAAGACAGATTATGAAAGTTGTAACTCTGATCATCCACTCCACAATTGGACTACTGGAGCTGGAAGAGATGTGGTTCCCCTGAATGTAACACGCGATTACTATTTCATCAGTGGCAAAGGGTTCTGCTTTGGTGGCATGAAGATAGCTGTTCATGTTGAAAAGATACCACCACCACCAAAAGCTTCTCCTATAAAAGCTGGAGCACCAACCCTTTCCTCTAGAGGTCACATTCTTCTCATGCCTGTTGTTTTTGCCATTGGAGCAGCATGGGATGCATTCATTCATTTCTGGTGA 525 0.4305 MEGMKRVLSPPMLLLFLGFIVLIMLPQTSATRWTVGGSNFWNTNFNYTTWVKDKHFYIGDWLYFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRDYYFISGKGFCFGGMKIAVHVEKIPPPPKASPIKAGAPTLSSRGHILLMPVVFAIGAAWDAFIHFW* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0230 174 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Apr6g0230 174 PANTHER LAMIN-LIKE PROTEIN 10 166 - -
Apr6g0230 174 Gene3D - 29 132 IPR008972 -
Apr6g0230 174 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
Apr6g0230 174 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Apr6g0230 174 PANTHER BLUE COPPER PROTEIN 10 166 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0230 Apr-Chr6 2413493 2415310 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0230 15 174 Phytocyanin Superfamily AT5G15350 53.086 2.37e-63 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0230 - - mtr:MTR_6g013420 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0230 6 2413493 2415310 Apr6g0230 6 2413493 2415310 ECH