Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1649 ATGGAAACTCAACAACAACAACCCATCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGTGGTAGCAGCCCCGGAAAAAATCCCAGCTACCAACTCGCTGCTATTCAACTCGGAAAACAACTGGTGGAGAGGAACATTGACTTGGTTTATGGAGGAGGAAGCATTGGATTGATGGGTCTAATATCACAAGTTGTGTATGATGGGGGACGCCACGTGTTAGGAGTGATACCCAAGACACTTATGCCAAGAGAGATAACTGGAGAGACAGTAGGAGAAGTAAGAGCTGTATCAGGAATGCACCAACGCAAGGCTGAAATGGCCCGACAAGCAGATGCATTTATCGCCCTGCCAGGTGGATATGGCACCCTTGAAGAACTATTGGAAATTATCACCTGGGCTCAACTAGGTATCCACGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAGCTCGAGGAATATGTCCCCGAGCACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCTCGTTGA 663 0.4827 METQQQQPIKSRFRRICVYCGSSPGKNPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPKTLMPREITGETVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1649 220 PANTHER LOG FAMILY PROTEIN YJL055W 6 216 - -
Apr5g1649 220 Gene3D - 2 190 - -
Apr5g1649 220 SUPERFAMILY MCP/YpsA-like 12 191 - -
Apr5g1649 220 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 6 216 - -
Apr5g1649 220 TIGRFAM TIGR00730: TIGR00730 family protein 15 191 IPR005269 GO:0009691|GO:0016787
Apr5g1649 220 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1649 Apr-Chr5 20125769 20128628 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1649 5 20125769 20128628 Apr5g1649 5 20125769 20128628 ECH
Apr9g0617 9 9701309 9704696 Apr5g1649 5 20125769 20128628 PCT