Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1647 ATGTTACCGCCAACATTTCTGATGGATCGACGCTGGCCTTGGAAGAAAAAATCGTCAGAGAAGACTGTGCTTGAGAAAGCAGCTACTGCATTGGACTCCTCCGATGCTTCCAACCAGGATAACAACAAGAAACGAAACTATATTCAAATCTCTGTGGAATCCTATTCACATTTGTCTGGCTTGGAGGATCAAGTGAAGACATATGAGGAAAAAGTTCAGACACTAGAGGATGAGATCAAGGAAATGAATGAAAAGCTATCTGCAGCAAACTCTGAGATCAATACAAAGGAAAGCATGGTTAAACAACATGCTAAGGTAGCTGAAGAAGCTGTATCAGGTTGGGAAAAGGCTGAAGCTGAAGCTTTGGCATTGAAGAACCATCTAGAATCTGTCACTCTTCTAAAACTCACTGCTGATGATCGTGCAACTCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATACGAAACCTTAAGGAAGAACATGAACAAAAAATACAGGAAGTTGCTCTCTCGAAAACCAAGCAATTGGACAAGATTAAGGGAGAACTTGAGGCAAAGATAGTTAACTTTGAACAGGAACTTCTTAGGTCAACTGCGGAAAGTGGGGCTTTGTCAAGGTCGTTGCAGGAGCGCTCTAACATGCTAATCAAATTGGGCGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCTTCTTAAGAGCAACATAGAATCATGTGAAAGGGAAAATAATTCACTTAAATATGAACTTCATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTATGAGATCTGCAGAAGCTGCTAACAAGCAGCATACGGAGGGTGTAAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAAAGATTACGTGGTCTTGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAAGTTGAAAACCTTGGTCGAGATTATGGAGAAAGTCGATTAAGGAAGTCTCCTGTGAAGCCTGCTACCCCTAATTTGTCTCCGTTACCTGATTTTACCCTGGAAAATGTGCAGAAATTCCAGAAGGAGAGTGAATTTCTTACAGAACGTTTACTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGCAACAGTGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTAAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGACAAGTAACCAGCTGAAAGTATCTCCAACGTCCGTTGTCCAGATCACTCATGAAAGCATTTATAGTCAAAATGCAAGCAATGCACCAAGCTTGGTCTCCATGTCTGAAGATGGAAACGATGATGCAGGAAGTTGTGCCGAGTCTTGGTCTACAGCAATGATCTCTGGGCTATCCCAATTTCCTAAAGAAAAGTGCACTGAGGAATCAAGCAAATCTGAAGCGACTAAGAAGTTGGAACTAATGGATGACTTTCTAGAGGTGGAGAAGTTGGCTCATTTGTCAAATGTTTCCAATGTAGAAGCCGCTGTTTTAATTTCTTCTAACAATAAGGCTACTGACATTGTCGCCAATGATGTGTCAGAAGTTAGTGCTGGCAATGAAAAGAACGGTAATTCAGATCCATTCCCAAGTCAAGTGTCTTCTGGTGCATTGATGTTGGCAGCTGATCCCCAAACCAATGTTGGTGGCTTGTTACTAACAGAACTTAGATCAAGAATTTTAATGGTTTTTGAGTCCTTAGCTAAGGATGCTGATATAGGGAAGATTGTGGAGGATATTAAACATGTGCTTGAAGATTCACATGACACTGCCCCCCACCACTCTGTGGATGCCCATTCTTCTGATGCCAAATGTGATAGGCGGGATAATCCTGAAGATGCTGGCTTAAATCTTGAAAATGAAAGAATTTCATCTCATCAACCCAAAGAATACGTGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTCAAATTCATGACTTTGTATTGTTCCTAGGAAAGGAAGCGACAACATTTCATGACATATCTTCTGATGGAAATGAAATGAGGCAAAAGATTGAGGAGTTCTCTGTCACATTTAATAAAGTATTATGCAACAATGCAAGTTTACTACAGTTTGTTCTTGACCTGTCATATGTCCTAGCTAAAGCAAGTGATTTCAGATTTAATGTCCTTGGTTACAAGTGTACAGAAACTGAAACTAACAGTCCTGATTACATAGATAAGATTGCTTTGCCTGAAAACAAGTTAGCTCAAGACAAATCATCTGGAGAAAGATATCAAAATGGTTCTTCCCATATGCTTAATCCATGTTCTAATCTTGAGGTTCCTGACGATGGAAATTTGGTCGCAGGCTATAAAGGGAATGCTGCCTCTCACAAACTGTCAATGGAGGAATTTGAAGAATTGAAATTAGAGAAAGAAAAACTAGTAATTGATTTCTCAAAATGTACCGAAAATCTTGAAATAACAAAGTCTCAATTGCTAGAGACTGAGCAACTTCTAGCAGAAGTTAAATCACAATTGGCCTCTGCTCAAAGATCGAACAGCTTGGCTGAGACACAGCTAAAGTGTATGGCAGAATCCTACAAGACACTTGAAACACGTGCCCAAGAGTTTGAAACTGAGTTGAACCGTCTGCAATGCAAGACAGAAACTCTGGAGAATGAGCTTCAAGATGAAAAGAGGGCTCATGATGCTGCTTTGGCCAAGAGCAGAGAGCTTGAAGAGCAGTTGCAAAGGATTGAGAGCTCAGCAGCTGATAATGACCTCAAGACTTCGAATGAGAGAGATTTGGCAGCAGCTGCTGAAAAGCTGGCTGAATGTCAGGAAACCATATTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCTCAAACTGAGCCAATTGAAGCATCTTACAATAAGATAAACCCAAAGGTTGAAGGCTTCACAGAAGATGAACCTACTACTAGTAGCACAAATTTTCAAGAATTAGGTCAGTTGGAGATGGATGGTGCTACTTCTGCTTTTGTGCAAAGATTGAGTTCGGAGTCCCCTTTGCATTTTTCCAACAGTTTATTTAGCCCGTCAGATAATGAGTCCACGCCCCTTCCAGCCAGATCCCCAGTACAGCATCCAAAATCAAAACCAAAACACAGGCCTACCAAGTCAGCCTCTTCTTCAGCTTCTTCTGCCACTACACCTGAGAAACATGCACGGGGATTTAGTAGATTCTTTTCACCAAAAGGAAAACCCACTCATTGA 3255 0.4092 MLPPTFLMDRRWPWKKKSSEKTVLEKAATALDSSDASNQDNNKKRNYIQISVESYSHLSGLEDQVKTYEEKVQTLEDEIKEMNEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTADDRATHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDKIKGELEAKIVNFEQELLRSTAESGALSRSLQERSNMLIKLGEEKAHAEAEIELLKSNIESCERENNSLKYELHVVSKELEIRNEEKNMSMRSAEAANKQHTEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKPATPNLSPLPDFTLENVQKFQKESEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQTSNQLKVSPTSVVQITHESIYSQNASNAPSLVSMSEDGNDDAGSCAESWSTAMISGLSQFPKEKCTEESSKSEATKKLELMDDFLEVEKLAHLSNVSNVEAAVLISSNNKATDIVANDVSEVSAGNEKNGNSDPFPSQVSSGALMLAADPQTNVGGLLLTELRSRILMVFESLAKDADIGKIVEDIKHVLEDSHDTAPHHSVDAHSSDAKCDRRDNPEDAGLNLENERISSHQPKEYVQITSDLEAAISQIHDFVLFLGKEATTFHDISSDGNEMRQKIEEFSVTFNKVLCNNASLLQFVLDLSYVLAKASDFRFNVLGYKCTETETNSPDYIDKIALPENKLAQDKSSGERYQNGSSHMLNPCSNLEVPDDGNLVAGYKGNAASHKLSMEEFEELKLEKEKLVIDFSKCTENLEITKSQLLETEQLLAEVKSQLASAQRSNSLAETQLKCMAESYKTLETRAQEFETELNRLQCKTETLENELQDEKRAHDAALAKSRELEEQLQRIESSAADNDLKTSNERDLAAAAEKLAECQETIFLLGKQLNALRPQTEPIEASYNKINPKVEGFTEDEPTTSSTNFQELGQLEMDGATSAFVQRLSSESPLHFSNSLFSPSDNESTPLPARSPVQHPKSKPKHRPTKSASSSASSATTPEKHARGFSRFFSPKGKPTH* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1647 1084 MobiDBLite consensus disorder prediction 970 989 - -
Apr5g1647 1084 MobiDBLite consensus disorder prediction 1019 1038 - -
Apr5g1647 1084 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 8 1084 - -
Apr5g1647 1084 Coils Coil 58 99 - -
Apr5g1647 1084 Coils Coil 217 251 - -
Apr5g1647 1084 MobiDBLite consensus disorder prediction 1052 1067 - -
Apr5g1647 1084 Pfam Filament-like plant protein, long coiled-coil 96 965 IPR008587 -
Apr5g1647 1084 Coils Coil 824 921 - -
Apr5g1647 1084 MobiDBLite consensus disorder prediction 1019 1084 - -
Apr5g1647 1084 Coils Coil 353 373 - -
Apr5g1647 1084 SUPERFAMILY Tropomyosin 802 984 - -
Apr5g1647 1084 PANTHER FILAMENT-PLANT-LIKE PROTEIN 8 1084 - -
Apr5g1647 1084 MobiDBLite consensus disorder prediction 604 631 - -
Apr5g1647 1084 Coils Coil 142 202 - -
Apr5g1647 1084 Coils Coil 256 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1647 Apr-Chr5 20095958 20101416 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1647 5 20095958 20101416 Apr5g1647 5 20095958 20101416 ECH
Apr9g0570 9 8158792 8164728 Apr5g1647 5 20095958 20101416 PCT