Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1637 ATGACTCCTTCACTTTTCCTCGTCCCTCTTCTGCTCCACATTCTCCTATCCACGCCGTCTCCGGCTGAAGCCGACAACGGCCAGTGGCAGCTCCTACAAGAAAACATTGGCGTTGTGGGCATGCACATGCAGCTTCTCCACAATGACCGCGTCGTCGTTTTGGACCGAACCGACTTCGGCTTCTCAAACTTAACGTTACCCAAAGGAAGATGCCGCAACAACCCAAAAGAAATGGTCGTGCAAACAGACTGCACCGCTCACTCCCTCGAATACGACGTCGTATCCAACACATTGCGCCCTCTCTTCGTGCAAACCAACGTGTGGTGTTCCTCCGGCTCAGTGTCCCCCGACGGAACCTTGGTCCAGACCGGCGGCTTCAACGACGGCGACCGCGCCGTCAGGACATTCAACCCGTGCGGCACGTGCGACTGGGAGGAGGTTAACAATGGACTCGCCGCGCGTAGATGGTACGCGACCAATCATGTTTTGCCAGATGGAAGACAAATCGTGATCGGCGGAAGGAGGCAATTCAACTACGAGTTTTATCCCAAGACAGAAGCCAATGCTAAGAACACTTACAGTTTACCGTTTCTTGTACAAACCAACGACCGTGACGCAGAAAACAACCTTTACCCGTTTGTTTTCTTGAACGTGGATGGTAACCTCTTCATCTTTGCCAACGACCGCGCTATCTTACTCGATTACAATAAAAACAGAGTGGTGAAAACGTACCCTCGAATACCCGGTGGAGACCCAAGGTGTTATCCTAGCACAGGTTCCGCGGTTTTGCTTCCTCTCAAGAATTTGCAAGCGAAGAATGTTGAGGCTGAGGTGTTGATTTGCGGTGGAGCCCCCAGAGGGGCTTTTCCGCAAACCCTCTCCGGTCGGTTTGTCGGAGCATTGAAAACGTGCGCTCGAATTAAAATCACCGACCCTAACCCGGATTGGGTAATGGAAACCATGCCTGGTGCCAGAGTCATGAGTGACATGGTTATGCTTCCCAATGGCAACGTTTTGATTATCAATGGAGCCGCTGTAGGGACTGCGGGTTGGGAATTGGGCCGAAACCCGGTTTTGAACCCGTTTCTTTATAAACCCGATAGCCCACTCGGGTCGCGGTTCGAGTTGCAAAACCCGTCGAGCATTCCCCGAATGTACCATTCCAGTGCCGTTTTGCTTCGCGATGGTCGAGTTCTCGTTGCTGGGAGCAACCCTCACATATTTTACAATTTCAGCAACGTTATGTTCCCAACGGAATTGAGGTTGGAAGCGTTTTCTCCGTCGTATCTTGAGGCTGGATTCTCTGACGTGCGTCCCAGAATCGTGGCTCCAGAATCCCCAACCAAACTCAAGTACGCTCAGGCGTTGAAGATTCGGTTCGAGGTGACGGCGACTTTGGCTCGTGATTCTGTGACGGCGACGATGCTGGCGCCGCCGTTTACGACGCACTCGTTCTCGATGAATCAGAGGGTGTTGGTGCTGGAGCCGAAGAATTTGAATGATGTTGGGGAATCAACTCATGAAGTTGAAGTTACTGCGCCAAGTTCGGCTATTCTTGCACCACCCGGTTTCTATTTACTGTTTGTGGTTCATCAAGAGATTCCAAGCCAAGGTGTTTGGGTCCAAATACTGTGA 1635 0.5174 MTPSLFLVPLLLHILLSTPSPAEADNGQWQLLQENIGVVGMHMQLLHNDRVVVLDRTDFGFSNLTLPKGRCRNNPKEMVVQTDCTAHSLEYDVVSNTLRPLFVQTNVWCSSGSVSPDGTLVQTGGFNDGDRAVRTFNPCGTCDWEEVNNGLAARRWYATNHVLPDGRQIVIGGRRQFNYEFYPKTEANAKNTYSLPFLVQTNDRDAENNLYPFVFLNVDGNLFIFANDRAILLDYNKNRVVKTYPRIPGGDPRCYPSTGSAVLLPLKNLQAKNVEAEVLICGGAPRGAFPQTLSGRFVGALKTCARIKITDPNPDWVMETMPGARVMSDMVMLPNGNVLIINGAAVGTAGWELGRNPVLNPFLYKPDSPLGSRFELQNPSSIPRMYHSSAVLLRDGRVLVAGSNPHIFYNFSNVMFPTELRLEAFSPSYLEAGFSDVRPRIVAPESPTKLKYAQALKIRFEVTATLARDSVTATMLAPPFTTHSFSMNQRVLVLEPKNLNDVGESTHEVEVTAPSSAILAPPGFYLLFVVHQEIPSQGVWVQIL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1637 544 Pfam Glyoxal oxidase N-terminus 41 283 IPR009880 -
Apr5g1637 544 Gene3D Immunoglobulins 437 544 IPR013783 -
Apr5g1637 544 SUPERFAMILY E set domains 434 543 IPR014756 -
Apr5g1637 544 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 15 543 - -
Apr5g1637 544 Pfam Galactose oxidase-like, Early set domain 438 543 IPR015202 -
Apr5g1637 544 SUPERFAMILY Galactose oxidase, central domain 90 431 IPR011043 -
Apr5g1637 544 Gene3D - 23 434 IPR037293 -
Apr5g1637 544 PANTHER SECRETED PROTEIN-RELATED 15 543 - -
Apr5g1637 544 CDD E_set_GO_C 433 543 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1637 Apr-Chr5 20014915 20016549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1637 5 20014915 20016549 Apr5g1637 5 20014915 20016549 ECH
Apr5g1637 5 20014915 20016549 Apr9g0558 9 7908275 7909912 PCT