Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1619 ATGGCATTCCCACAGCTCATTCCTACTTCGCCTTCTTCTTCGTCACTACCTCACAACCCCTACTTAAACCCCATCAGGCTCTCCGCATACCGCAGATTCCCCTCCTCCACATCGCAGAATCTTAATATTCTCCGCCGCCGGCGCCGGAAGCTGAATTCCGTTCTCCGGTGCTCTGCCTCGTCTTTCTCGGAGAAGCACCACACAAACTCCCCCAAGTCCGACGACTTGGTGGAGCTCCCTCTCTTCCCTCTCCCGCTGGTCCTCTTCCCCGGCGCCATACTTCCGCTTCAGATCTTCGAGTTTCGCTACCGCATCATGATGCATACTCTCCTCCACACCGATCTCCGATTCGGTGTCATCTACACTGACTCCGTTTCTGGAACTGCCGACGTAGGCTGCGTCGGCGAAGTCATTAAGCACGAGCGCCTCGTGGACGACCGGTTCTTCCTGATCTGCAAAGGCCAGGAGCGGTTCCGCGTGAGCAACGTGGTGCGCACGAAGCCGTACCTGGTGGCGCAGGTGACGTGGCTGGAGGACAGGCCTTCATCGTCTTCGAAGGAGGTGGATGTGGAGGGTTTGGCGAACGAGGTGGAGACTTACATGAAGGACGTTATTCGGTTATCGAATCGGTTGGGAGGGAAGGCGGAGAAGGAGGTTGGGGATTTGAGGAGGAACTTGTTTCCGACGCCTTTTTCGTTCTTTGTTGGGAGCACGTTCGAGGGCGCTCCGAGAGAGCAACAAGCGCTGCTTGAATTGGAGGACACCGCCTCAAGATTGATGAGGGAGAAGGAAACCTTGAGGAATACGCTTAATTATCTAACTGCTGCCTCTGCTGTCAAAGACGTCTTTCCTTCTTCTTCTTCTTCGTCCTCTTCTTCTTCTTCTTCCTGA 891 0.5499 MAFPQLIPTSPSSSSLPHNPYLNPIRLSAYRRFPSSTSQNLNILRRRRRKLNSVLRCSASSFSEKHHTNSPKSDDLVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVIYTDSVSGTADVGCVGEVIKHERLVDDRFFLICKGQERFRVSNVVRTKPYLVAQVTWLEDRPSSSSKEVDVEGLANEVETYMKDVIRLSNRLGGKAEKEVGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTASRLMREKETLRNTLNYLTAASAVKDVFPSSSSSSSSSSSS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1619 296 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 266 IPR003111 -
Apr5g1619 296 SUPERFAMILY PUA domain-like 78 267 IPR015947 -
Apr5g1619 296 Gene3D - 76 179 IPR046336 -
Apr5g1619 296 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 1 286 - -
Apr5g1619 296 Coils Coil 249 269 - -
Apr5g1619 296 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 1 286 - -
Apr5g1619 296 ProSiteProfiles Lon N-terminal domain profile. 79 268 IPR003111 -
Apr5g1619 296 SMART lon_5 78 268 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1619 Apr-Chr5 19839917 19841964 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1619 5 19839917 19841964 Apr5g1619 5 19839917 19841964 ECH
Apr9g0545 9 7609306 7610657 Apr5g1619 5 19839917 19841964 PCT