Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1534 ATGGAGAGAACAAAGTCAGCCCTTCTACAAATTCAGCCTCCAACCTATGGAAACTTAGTCACTATTCTCAGCATCGATGGGGGTGGTATTAGGGGCATTATCCCTGAGTTGGATGGTGAATCTGCAAGGCTCGCAGACTACTTTGACGTGATTGCAGGAACAAGCACAGGTGGACTTGTTACCGCCATGTTAAGTGCTCCAAATGATAAGCAGCGTCCACTTTTTGCCGCCAAGGATATAAAGCCCTTCTACTTGGATCATAGTCCAAAGATCTTCCCACAATACAGTGGCCTTTGGGGATCCATAAGAAAATTGTTGAGATCATTAAGAGGACCAAAATACGATGGGAAATACCTTCATGAGGTCCTGAGGGAGAAGCTAGGGGAAACTCGTGTGCATGAAACGCTGACCAACATTGTGATTCCCACCTTTGACATCAAGGCATTGCAACCAATCGTTTTCTCTTCTTATCAAATCAAGAATACTCCTAGCTTGGATGCAAGACTCTCTGACATATGCATCGGCACCTCCGCTGCACCTACTTATCTTCCAGCCCACAACTTCAAGAACGAGGACACAGAAGGGAACGTACACGAATTCAACCTTGTTGATGGTGGCGTTTGTGCTAATAATCCGACTCTAGTGGCCATGAATCAAGTAACCAAGCAGATCATGAATGAAAATCCTGATTTCTTCGCCATCAAGCCCATGGAATATGGTCGCTTCCTGATAATCTCACTGGGCACTGGGACACCCAAGAATGAACAGAAATTCAATGCAAAAATGGCAGCCAAATGGGGTCTATTGGATTGGTTAACTTACAGTGGTTCTACTCCTTTAATCGATGTGTTTACTCAATCTAGCGATGATATGGTTGATTTTCATCTTGCTACTGTCACTCAAGCGCTTCATTCAGAAGATAATTACCTTCGGATACAGGATGACACATTGACCGGTACGTACTCATCAGTTGACATTGCCACGAAAGAGAATTTGGAAAAACTCAGCCAAATTGGTGAAAAATTGTTGAAGAAACCAGTCTCTAAGATGAATTTGGAGTCTGGTTTGTTTGAGCCCATGCAAAATGGAGAGACCAACGAAGATGCTCTCAGAAGGTAA 1119 0.4379 MERTKSALLQIQPPTYGNLVTILSIDGGGIRGIIPELDGESARLADYFDVIAGTSTGGLVTAMLSAPNDKQRPLFAAKDIKPFYLDHSPKIFPQYSGLWGSIRKLLRSLRGPKYDGKYLHEVLREKLGETRVHETLTNIVIPTFDIKALQPIVFSSYQIKNTPSLDARLSDICIGTSAAPTYLPAHNFKNEDTEGNVHEFNLVDGGVCANNPTLVAMNQVTKQIMNENPDFFAIKPMEYGRFLIISLGTGTPKNEQKFNAKMAAKWGLLDWLTYSGSTPLIDVFTQSSDDMVDFHLATVTQALHSEDNYLRIQDDTLTGTYSSVDIATKENLEKLSQIGEKLLKKPVSKMNLESGLFEPMQNGETNEDALRR* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1534 372 PANTHER XYLOSE ISOMERASE 1 372 - -
Apr5g1534 372 CDD Pat17_isozyme_like 36 355 - -
Apr5g1534 372 PANTHER PATATIN 1 372 - -
Apr5g1534 372 SUPERFAMILY FabD/lysophospholipase-like 18 353 IPR016035 -
Apr5g1534 372 Gene3D Cytosolic phospholipase A2 catalytic domain 10 372 - -
Apr5g1534 372 Pfam Patatin-like phospholipase 23 217 IPR002641 GO:0006629
Apr5g1534 372 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 217 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1534 Apr-Chr5 19225092 19227250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1534 1 370 Miscellaneous Gene Families AT2G26560 63.351 8.43e-173 486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1534 5 19225092 19227250 Apr5g1534 5 19225092 19227250 ECH
Apr9g0444 9 6209233 6212811 Apr5g1534 5 19225092 19227250 PCT