Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1533 ATGGAGGATAGAAGCAACCCTGAAATTTCTCTCGAGGTTCCTCCTTACCTTCGAGTATACAAGGATGGAACCATAGAGAGAATAGCCGGAAAACAAGTTGCTCCTGCGGGCATCGATTCCGACACCAACGTTGTTTCCAAAGACATCCTCGTCGTCCCAGAAAGAGGTGTCACGGCCAGGCTGTATCTTCCCAATTCCACCGCCAAAACCACCAAGCTTCCTTTACTTCTCTACTTTCATGGTGGGGCCTTTTGCATCTCTTCAGCCTCCGACCCCCTTTACCATAATTCCCTCAACAAAATCGTTGCCGAAGCTAACGTTGTTGCTCTCTCCATCAATTATAGGTTAGCACCAGAACATCCACTTCCAACCGCGTACGATGATTCTTGGGCTGCGATTCAATGGGTTGCTTCTCATGCTGCGGGTCAGCATGAAGAAGATAATGAAAATTGGCTCAGGGACAACGTTGACTATGACAGGGTGTTCTTGTCTGGTGACAGCGCAGGTGCTAACATTGGACACTACATGGCTTTAAGGTTACATGCTCTTAACTCTTGTCATACAAAGGATTTCAAGGTTCCCGGTCTTATCATGGTGAATCCTTATTTCTGGGGGAAGGAACCCATTGGCGTGGAGATCAGTAATACAGAGAGTAAGAAAATGGTGGACTTGTGGTGGGATTTTGTTTGTCCCTCTGATAAAGGGTGTGATGATCCTCTAATCAACCCCTTTGTGGAGGAAGCTCCGAGTTTTGAAGGGATGGGTTGCAACAAGGTTCTTGTTATCATTGCCGAGAAAGACATATTGAAGGAAAGAGGGAAGCTTTATCATAAAAAATTGGTGAACAGTGATTGGAAAGGAACGGCTGAGTTTTATGAGACTCTTGGAGAGGATCATGTCTTTCATATCTTCAATCCCAATTGTGACAAAGCCAAGAGCTTGTTTAAACGCATTGCTAGTTTCATTAATGAACAATGA 978 0.4499 MEDRSNPEISLEVPPYLRVYKDGTIERIAGKQVAPAGIDSDTNVVSKDILVVPERGVTARLYLPNSTAKTTKLPLLLYFHGGAFCISSASDPLYHNSLNKIVAEANVVALSINYRLAPEHPLPTAYDDSWAAIQWVASHAAGQHEEDNENWLRDNVDYDRVFLSGDSAGANIGHYMALRLHALNSCHTKDFKVPGLIMVNPYFWGKEPIGVEISNTESKKMVDLWWDFVCPSDKGCDDPLINPFVEEAPSFEGMGCNKVLVIIAEKDILKERGKLYHKKLVNSDWKGTAEFYETLGEDHVFHIFNPNCDKAKSLFKRIASFINEQ* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1533 325 Pfam alpha/beta hydrolase fold 76 302 IPR013094 GO:0016787
Apr5g1533 325 Gene3D alpha/beta hydrolase 16 325 IPR029058 -
Apr5g1533 325 PANTHER ARYLACETAMIDE DEACETYLASE 6 324 - -
Apr5g1533 325 SUPERFAMILY alpha/beta-Hydrolases 16 324 IPR029058 -
Apr5g1533 325 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 6 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1533 Apr-Chr5 19221361 19222666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1533 6 322 Carbohydrate Esterase AT3G48700 43.119 5.65e-90 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1533 5 19221361 19222666 Apr5g1533 5 19221361 19222666 ECH
Apr9g0440 9 6126958 6128256 Apr5g1533 5 19221361 19222666 PCT