Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1525 ATGCAAGCGGTAGGGAGGTTGGGGAGCTACATTAGTCAGGGCGTGTACACCGTTTCAGGGCCCTTTCATCCGTTCGGTGGCGCCGTCGATATTGTGGTGGTGGAACAAGAAGATGGGAGCTACAAGTCTTCGCCTTGGTACGTACGATTCGGAAAATTTCAAGGGGTTTTGAAGGCCAGGGAAAAAGTGGTGGATATTCGTGTGAATGATGTGAAAGCTGGTTTCCAAATGCATCTTGATCATAAAGGGGAAGCTTTTTTTCTCAGGGAAATTGATGCACAAGAAGCGCAAGAATCTGGGTACTTTGGTGATGACGTGGACGATCACCCTCGTTCTCTGAGGTCAAAAAGTTGTAACTTTGATGCAAATGATGGTGGCAATATTGTGGATAGGAGTGGTTCTCGGCGTTCACGAATACTTGGGCTTATGTTTGGGCGAAAGTCTATGAAGCCGGAACGTGGAGATGATGATGGAATTGAAAACAGGGTTGATTCGTTGGAGCGTGCTGAGATTGCCGCTAACTTGTTGGACCTCAAGTGGTCCACGAATCTTTCTGGACAACGTGATCAGAATGTTCTTGATACCTCGCCTCCTGAATTGAACGAGGATGTTTGTTTTGATGTTGCACAATCTGATGTACAAGTTGCATGTGTGGAGATGAAGCTTGAAACTTGCATGGAAAACCTATTGAATGGAGAAGAAATTTCTGATGGGAACACTGGTAATGATAATGATGAGGACATTTCAGTTGATAGAGTCCATGTCAATTTTCATGATGAAGTCTTGCATAGTGCAACTGTATTGATATCTGAGGGTACAGAAACTGAGGAAGTTACTAAGAATGCTGATCTTGGGATGCCGATATTGGAATTATCTGAGTTTCAGTCTCTGGTTCGGCAAACAAATTGTTCTGATTCTGATGTTGGTATTTACAATGAGGTGGTTGTTGAAGAGCAAACATTTCCAAAATCTCATACTGTTGATATGGGTCTCGGACATTCTACAAGTGAGAAAGTTGAGTCAAATAGTGTTACCAAATCTTCCAGTTCCAGCAGCTTGGATGAAACGAAGGGCAAAGATGTCTCTAGCACATTATCATCTCCTCTAAACTCTATTCGTGATTGTTTGCCCAGAAAAGCATCAAGGATATCACCATCAACAAGTTTGGGGGAAGACAATTTCCTTTTTAGTGACCTTGATGAAACTGGAAACACTGATCGATTTGAGAGATCATTCTCCCATGAACATGTAGATAAAGAAGATCATATTTCTCATGAGAATGGCATTGAAAAGTTAACAGCAATATCCACTCCCATAGCTATTCCAAGAAACGAGGCTGCTGCGGAGGAAGTTGGGCAGCACATTGGATCCTTGCCAAATATTTCTTCTAGTACTAACAGCATTGCCCAACGAGATGTTTTTTATCCTTTAAGTCAGTCGCTAGACTCAAAATCCTCATCCTTACAGTGGGAACTTGCTGGAAAAGATGACTTGAACTGTCTAAAATCAGATGAGGACAAAGAAAACCAGTTATCACATGAGGAGCCAGGTGCCAAGGATTACCATGATTCTGGGGAATTCGAAGGAGATCCATCAACACACATGCCTTCCCCTGGTGGAAATTGGAGACTTTGGCCTTTCTCTTTGAGGAGAACAGAATCTAGAAATCCTATGCTGCCGCCTACTCCAAGTCCAAGGGGTGCCAAAAATAACACTTTTGGTATTTCTCCAGAGCATACGATTACTGCAGATATGAACAAAAAAGAGCTGACAGCCAATATACTGAAAAAGAAAGTTAGGGTAACAACTCCAACTTCTGAACAGCTAGCATCCTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGATGCTCGAATATATTTGTGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGTACAATTACAAGGTCAGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCCCATTTATTCTCTGCTATCAAGGAAAATGGTTACCAACTGCTTTTCCTCAGTGCTCGTTCAATTTCTCAGGCCTATCTTACACGGCAATTCCTAGTTAACCTTAAACAGGATGGGAAAGTTTTACCAGACGGTCCTGTTGTTATTTCCCCAGACGGACTTTTCCCCTCTCTATATCGAGAAGTTATTAGGAGGGTTCCCCATGAATTCAAAATTGCATGCTTAGAGGACATCAAAGCACTTTTTCCTTCTGATTGCAATCCGTTCTATGCTGGTTTCGGAAATAGGGATACCGATGAAATCAGCTACCTTAAGGTTGGAATTCCCAAAGGAAAAATCTTCATTATTAATCCCAAGGGAGAGATTGTTGTAAACCGTGTTGACACAAAATCATATACTTCTCTGCATGCTCTCGTGAATGGAATGTTCCCCCCTATGAACTCTTCTGAGCAGGAGGACTTTAATTCATGGAATTTCTGGAAGCTACCCCCTCTTGCAGTAGATATTTGA 2547 0.4248 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVEQEDGSYKSSPWYVRFGKFQGVLKAREKVVDIRVNDVKAGFQMHLDHKGEAFFLREIDAQEAQESGYFGDDVDDHPRSLRSKSCNFDANDGGNIVDRSGSRRSRILGLMFGRKSMKPERGDDDGIENRVDSLERAEIAANLLDLKWSTNLSGQRDQNVLDTSPPELNEDVCFDVAQSDVQVACVEMKLETCMENLLNGEEISDGNTGNDNDEDISVDRVHVNFHDEVLHSATVLISEGTETEEVTKNADLGMPILELSEFQSLVRQTNCSDSDVGIYNEVVVEEQTFPKSHTVDMGLGHSTSEKVESNSVTKSSSSSSLDETKGKDVSSTLSSPLNSIRDCLPRKASRISPSTSLGEDNFLFSDLDETGNTDRFERSFSHEHVDKEDHISHENGIEKLTAISTPIAIPRNEAAAEEVGQHIGSLPNISSSTNSIAQRDVFYPLSQSLDSKSSSLQWELAGKDDLNCLKSDEDKENQLSHEEPGAKDYHDSGEFEGDPSTHMPSPGGNWRLWPFSLRRTESRNPMLPPTPSPRGAKNNTFGISPEHTITADMNKKELTANILKKKVRVTTPTSEQLASLNLKDGMNTVTFTFSTAVLGKQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKALFPSDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGEIVVNRVDTKSYTSLHALVNGMFPPMNSSEQEDFNSWNFWKLPPLAVDI* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1525 848 PANTHER GH19076P 1 847 - -
Apr5g1525 848 MobiDBLite consensus disorder prediction 325 368 - -
Apr5g1525 848 Pfam LNS2 (Lipin/Ned1/Smp2) 602 823 IPR013209 -
Apr5g1525 848 PANTHER LIPIN 1 847 IPR026058 -
Apr5g1525 848 MobiDBLite consensus disorder prediction 506 541 - -
Apr5g1525 848 SUPERFAMILY HAD-like 640 790 IPR036412 -
Apr5g1525 848 SMART lns2 648 804 IPR031315 -
Apr5g1525 848 Pfam lipin, N-terminal conserved region 1 97 IPR007651 -
Apr5g1525 848 MobiDBLite consensus disorder prediction 329 368 - -
Apr5g1525 848 MobiDBLite consensus disorder prediction 506 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1525 Apr-Chr5 19167804 19176384 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1525 5 19167804 19176384 Apr5g1525 5 19167804 19176384 ECH
Apr9g0432 9 6036460 6041811 Apr5g1525 5 19167804 19176384 PCT