Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1499 ATGAGCCATTGGATACACGTGGCGGTTGCAGCATCCGCGGTGGGATGCGTTTCGACCCTTTTGTTGGTTTTCATCTGGCGTTGGTGTCATCAAAGAAAGCGTAGAAATTTCGTAGAACCCGCTAGCTTGACCAGAATGGAGAGTCTCCAAGCTGGGATTTCAACTCTTCATCACCAACCTTCTCAATTGGATCAAGGAAGCAAGAACAAGAGCAATTACAATTACTATGTTTTTCGTGGTGGGGTTTCTGGAAAAAGAACCTTGTTCAATTGGGGTGATCACCCTTCTATGGCTGCTGATGCTGTTGAAAATGGGTGGTCAAGATTCGCCTTCACGGGTTACAAGAGCTACACGCCATCTCCTTCAAAAAGATCAGCACTTTTAGGTGTGTGCGCTGCACCAACAAGTGATCATGGAAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGTCACGTGGATCTGCTGAGTTTATGCAGAAGGTGAGATTGAATCCTGGGATGAAAAAGTCTCATCAAAATAACAACAAAGACCCTTCTTCTATGATTGTTGCTTCTATCATTAGAACGGCTTTGCCACTTCCTGGCCCTCCTTTGGGGAACTGTGCTTTTCCACAAGAAGCATATTTTGAAATTACTATTTTGTATTCTCGTGGGGATGACTATGAATCGGTTGGGAAGAGTGAAGGTGAAAAGACCAAGCTCCTTGTTCAAGGTAACTCTAATGCTAAAGGGAATTCGGAGGCTTTGGTTCATGTTACCAGCAGCAATAGTCATAAAGCCAACAATGTTGAAGAAATAAAGCTTGGTGGCAAAGAGGGTGGGAAGAGTGAATCTGTGATGTTCTCGTTGGGATTAACCGCTGGAGGTTCTGTTCCTTTGAGAGTTCCCGGTAGCTACCCCGGGAGCATTGGCTTCAACTCCAACGGTTCTGTCTATCTTGATGGAATGAAACTTGTATTCGAGTCTGAGAAGGCAGAATGGGTAGGAACCGATAGGGTGATTGGTTGTGGGTTTGATCCTAGGCAGAAGAAGGTTTTCTTCACCTTAGACTCTGAGCTAGTGCATGTCATTCACTGCCAATCAGAAGAATTTGGCACTCCACTCTATCCAATCTTGGCTGCAAATATTGACATTCTGGTATTAATTAATTTTGGACAAAGTGCATTTAAATATGCACCTGCAAATGCCCAGAGAACACCAAATCCATGCTTTATAGCCCCACTTGTAAATTCCCCTGCTGCTACATTGGGCTATGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATTGATTCTCAGTGGCTCAATCGGTCTACAACCAAAGGAAGTCACAACAATGGGAGTAATACTAATACTAATAATCACACAACGGATTTTGATGAGGAATCTGAGGCTGATCTATTTGAAATCGTCTTAGATGGTTCTGGAAAATCTCCATACACAGCATCATAG 1452 0.438 MSHWIHVAVAASAVGCVSTLLLVFIWRWCHQRKRRNFVEPASLTRMESLQAGISTLHHQPSQLDQGSKNKSNYNYYVFRGGVSGKRTLFNWGDHPSMAADAVENGWSRFAFTGYKSYTPSPSKRSALLGVCAAPTSDHGRESEAEISWEVSRGSAEFMQKVRLNPGMKKSHQNNNKDPSSMIVASIIRTALPLPGPPLGNCAFPQEAYFEITILYSRGDDYESVGKSEGEKTKLLVQGNSNAKGNSEALVHVTSSNSHKANNVEEIKLGGKEGGKSESVMFSLGLTAGGSVPLRVPGSYPGSIGFNSNGSVYLDGMKLVFESEKAEWVGTDRVIGCGFDPRQKKVFFTLDSELVHVIHCQSEEFGTPLYPILAANIDILVLINFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNGSNTNTNNHTTDFDEESEADLFEIVLDGSGKSPYTAS* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1499 483 Pfam SPRY domain 208 385 IPR003877 GO:0005515
Apr5g1499 483 SUPERFAMILY Concanavalin A-like lectins/glucanases 294 391 IPR013320 -
Apr5g1499 483 MobiDBLite consensus disorder prediction 437 456 - -
Apr5g1499 483 Gene3D - 159 399 IPR043136 -
Apr5g1499 483 CDD SPRY_RanBP_like 274 385 IPR044736 -
Apr5g1499 483 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 3 481 - -
Apr5g1499 483 ProSiteProfiles B30.2/SPRY domain profile. 193 389 IPR001870 -
Apr5g1499 483 MobiDBLite consensus disorder prediction 437 459 - -
Apr5g1499 483 PANTHER RAN BINDING PROTEIN 9-RELATED 3 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1499 Apr-Chr5 18958267 18960749 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1499 5 18958267 18960749 Apr5g1499 5 18958267 18960749 ECH
Apr9g0404 9 5577041 5579242 Apr5g1499 5 18958267 18960749 PCT