Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1498 ATGGAAGCAGGGGAAGATTGCTGCGTGAAGGTTGCGGTCCATGTGCGGCCACTCATCGCCGACGAGAAGCTTCAAGGCTGCAAAGATTGTGTCACCGTCTTCGCTGGGAAGCCGCAGGTACAAATTGGCGCCCATTCCTTTACATTTGATCATGTTTATGGAAGCACGGGTTCTCCCTCAAGTGCCATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTCGCTTATGGTCAGACAGGTTCTGGGAAAACTTACACAATGGGAACTGGCTTTAAAGATGGTTTCCAAACAGGAATAATACCCCAAGTTATGAATGTTTTGTTTGGCAAAATTGGAACCTTAAAGCACCAAATCAATTTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGCTGGATCCGTCCTCCGTGAGCAAACCAGAAACTGCAAATGGACATGCAGGAAAAATGACCTCGCCCGGGAAGCCACCAATTCAAATTCGTGAGACGTCAAATGGTGTCATTACTCTTGCAGGATCTACTGAAGTCAGTGTAGCAACACTAAAAGAAATGGCTGCCTGCCTGGAACAAGGATCATTGAGCAGAGCAACTGGGAGCACAAATATGAACAACCAATCCAGCCGATCTCATGCCATCTTCACCATCACATTAGAACAAATGAGGAAGCTCAGCAATCCTAGTGATAGCTGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCGGAAAGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTCAAGGAAGGAGTTCACATTAACAAAGGTCTTCTAGCGCTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGCGTTCATGTTCCATATAGGGACAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGAGGTAACAGTAGAACTGTCATGATAGCCTGCATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAATACGCAAATCGTGCTCGCAATATCCAAAATAAGCCTGTTATCAATAGAGATCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCAGAACTTTGTGCCCGTGCCGGTGGCTCTTCGGAGGAAGTTCAGGTCCTTAAAGAAAGGATTGCTTGGCTGGAAGCTGCTAATGACGATCTTTGCCGTGAACTTCATGAATACCGTAGCAGATGCTCTGTCGTAGAACAAAGTGAAAAGGATGCTTATGACGGGAGCACATGCATTGTGAAGGCTGATGCAGTAAAGAGGAGCTTACCCATCGTAGAGGCTGATTATCCATTGAATGAAACAGCAGGTGATTCAAGGGAAATTGAAGAAGTAACAAAAGAGTGGGAGCACACACTTCTGCAAAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAGCAGAAAGAGTCTGAGATGAAGCTTTTTGGAATATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAAAAAGATAATGGAATTGGAGGATGAGAAGAGAGCAGTGCAGCAAGAGAGAGATTCGCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACGCAGAAATTGGAGGATATCCATGCCCACAAATTGAAAGCACTTGAATCACAGATTCTGGATCTGAAGAAGAAGCAAGAGAATCAGGTGCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTACAAGATGAAATACAGTGTATAAAGGCACAAAAGGTACAATTGCAGCAAAGGATAAAACAAGAGGCTGAACAGTTTCGACAGTGGAAAGCTTCTAGAGAGAAAGAGCTGTTGCAGTTAAGGAAAGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAAGCGTTAAATCAGCGCCAGAAAATGGTCCTTCAAAGAAAAACTGAAGAAGCTGCCTTGGCCACCAAGAGGTTAAAGGAGTTGTTAGAAGCCCGTAAAACTTCCAGCCGAGACACTTTAGTTACAATGAATGGAAGTGGCACAAATGGGCAGAGCCATGAGAAGTCTTTACAACGGTGGCTTGATCATGAACTAGAAGTCATGGTTAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAACAAAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGTTAGCCATGCTGAAACAAGTAAATGAGTTTGCTGCCAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCCTTGTCCCCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTGGCCATGGCTTCTCAGCTTTCAGAGGCAGAAGAACGAGAACGAGCCTTCACCAATCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGCCGCAGATGCCAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTCAGTCTATTACGGCAAAGTGAGATGAAGAGAAAAGAAGCTGAGAAAGAGCTAAAAGTGAGAGAACAAGCTGTTGCAACCACATTGGCTACGTCAGCTTCCGTAAACTCTCCAAATACATTGAAACAACACGCTGAAGACATGAAAGGACCCTTATCTCCAGTGTCTATGCCAGTACCAAAACAGCTAAAATATACACCAGGGGTTGCTAATGGCTCAGTGAAGGAATCAGCAGCATTTGCCGATCAGGGTAGAAGGATGATACCCATCGGGCAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAACTTCTGGCAAGTTATGGAGGTGGAAAAGAAGTCATCATCAGTGGCTACTACAATTCAAATGGAAGTGGCAGAAACCATGGAAACTTTCAGAATGGATTCGACACAACGATGAGACGATCATGAGAACAAGATCACGCTCACAGGCTTTGCTACATATCGGGTGA 3084 0.4364 MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVFAGKPQVQIGAHSFTFDHVYGSTGSPSSAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGFQTGIIPQVMNVLFGKIGTLKHQINFQLHVSFIEILKEEVRDLLDPSSVSKPETANGHAGKMTSPGKPPIQIRETSNGVITLAGSTEVSVATLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSNPSDSCLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANDDLCRELHEYRSRCSVVEQSEKDAYDGSTCIVKADAVKRSLPIVEADYPLNETAGDSREIEEVTKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGKKIMELEDEKRAVQQERDSLLAEVENLAANSDGQTQKLEDIHAHKLKALESQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKMVLQRKTEEAALATKRLKELLEARKTSSRDTLVTMNGSGTNGQSHEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAMLKQVNEFAAKGLSPPRKNGFARASSLSPNARMARIASLENMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSAADARCQLWEKDMEIREMKDQIKELVSLLRQSEMKRKEAEKELKVREQAVATTLATSASVNSPNTLKQHAEDMKGPLSPVSMPVPKQLKYTPGVANGSVKESAAFADQGRRMIPIGQLSMKKLAIVGQTSGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIRHNDETIMRTRSRSQALLHIG* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1498 1027 MobiDBLite consensus disorder prediction 151 176 - -
Apr5g1498 1027 Coils Coil 573 638 - -
Apr5g1498 1027 Coils Coil 860 894 - -
Apr5g1498 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 393 IPR027417 -
Apr5g1498 1027 Coils Coil 403 423 - -
Apr5g1498 1027 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr5g1498 1027 ProSiteProfiles Kinesin motor domain profile. 8 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1026 - -
Apr5g1498 1027 Coils Coil 523 557 - -
Apr5g1498 1027 Gene3D Kinesin motor domain 2 391 IPR036961 -
Apr5g1498 1027 CDD KISc_KIF4 7 364 - -
Apr5g1498 1027 Pfam Kinesin motor domain 16 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1026 - -
Apr5g1498 1027 Coils Coil 490 510 - -
Apr5g1498 1027 Coils Coil 671 691 - -
Apr5g1498 1027 SMART kinesin_4 6 371 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr5g1498 1027 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1498 Apr-Chr5 18936975 18947930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1498 49 387 Calmodulin-binding Proteins AT5G65930 35.103 1.32e-52 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1498 5 18936975 18947930 Apr5g1498 5 18936975 18947930 ECH
Apr9g0402 9 5543327 5554776 Apr5g1498 5 18936975 18947930 PCT