Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1492 ATGAAGCGTTGGGCGATAGCGGTGCATGGAGGAGCTGGTGTGGACCCTAACCTCCCAACCCACCGTCAGGAAGAAGCCAAACAACTCCTCACTCGCTGTCTCAATCTTGGCATCTCTGCACTCCGTTCCAATGCTTCCGCCCTCGACGTCGTTGAACTTGTCGTGAGGGAACTGGAAACGGATCCTCTGTTCAACTCTGGGCGTGGATCTGCCCTAACAGAGAAGGGAACAGTGGAGATGGAGGCAAGCATAATGGAGGGTACAAAGAGACGATGCGGCGCCGTTTCGGGCGTCTCCACCGTCAAAAACCCCATCTCACTCGCTCGCCTTGTCATGGAAAAGTCGCCACATTCCTACCTCGCTTTCTCCGGCGCTGAAGAGTTTGCCAGGCAACAGGGTGTGGAAGTTGCGGAGAACGAATATTTCATCACTCCCGATAATGTCGGTATGCTGAAACTGGCAAAGGAGTCTAACACAATCCTGTTTGATTATAGGATTCCGACGGCGGCAACCGACACATGCGGTACAGCCGTTGAGAGTCCCATGAAAATGAATGGATTGCCAATAAGCGTGTACACGCCGGAGACGGTAGGGTGCGTGGTGGTGGACAGCGAGGGAAGGTGTGCGGCTGCGACGTCGACAGGAGGGCTGATGAATAAAATGAGCGGTCGGATCGGCGACTCACCCCTGATAGGTGCTGGAACGTACGCGTGTGAGGTGTGTGGGGTCTCATGCACCGGGGAAGGGGAGGCTATCATACGTGGGACATTGGCGCGTGAGGTTGCGGCGGTCATGGAATACAAGGGCCTGGGGCTTCAGAAGGCTGTGGACTTCGTCATAAAACATCGACTCGATGAAGGGATGGCGGGGCTTATTGCGGTGTCTAATAGTGGTGAAGTGGCTTATGGCTTTAACTGTAATGGCATGTTTAGGGGATGCGCCACTCAGGATGGGTTGATGGAGGTCGGAATCTGGGAATGA 981 0.5474 MKRWAIAVHGGAGVDPNLPTHRQEEAKQLLTRCLNLGISALRSNASALDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMEGTKRRCGAVSGVSTVKNPISLARLVMEKSPHSYLAFSGAEEFARQQGVEVAENEYFITPDNVGMLKLAKESNTILFDYRIPTAATDTCGTAVESPMKMNGLPISVYTPETVGCVVVDSEGRCAAATSTGGLMNKMSGRIGDSPLIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQKAVDFVIKHRLDEGMAGLIAVSNSGEVAYGFNCNGMFRGCATQDGLMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1492 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 323 IPR029055 -
Apr5g1492 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Apr5g1492 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Apr5g1492 326 CDD Asparaginase_2 5 318 - -
Apr5g1492 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Apr5g1492 326 Gene3D (Glycosyl)asparaginase 196 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1492 Apr-Chr5 18877091 18878907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1492 2 286 Miscellaneous Gene Families AT4G00590 26.384 1.86e-18 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0392 9 5381150 5384058 Apr5g1492 5 18877091 18878907 PCT