Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1483 ATGGAGACTCGTGCTGCAAAGAGGAAGGCAAACGCTGCAAATGTAGTTGTAGTCCACAATCAACACTTAAAAAAGAAGCGGATCGTGTTGGGAGAACTTCCCAATATACCCAATCTTATACATCCCGCAACCTTGAACAAACACAAAGAGAAACTTCAATGTCAGAAGAATCCCAATATCAAGAAACAAGCTCTCTTAAAGAAGACCCTTTCTTCTCCTGATGCCAACTTTGATGACCCCCAGATTGGTGAACCTTATATATCTGATATCTATAAGTATCTTCGTACAATGGAGATGCAGAGAAAGAGAAGGCCAAGGACTGATTATATCGAGAAAGTTCAGAGGGAAGTTACAGCAAACATGAGAGGGATATTGGTGGATTGGTTAGTGGAGGTTGCTGAAGAGTACAAGCTTCTCTCTGATACCCTTCATCTCTCAGTTTCATACATTGATAGGTTTCTATCAGTTAATCCTGTGACCAAATCTAGGCTCCAATTGCTGGGTGTTTCCTCCATGCTTATTGCTTCTAAGTATGAGGAAATTACCCCTCCCCGTGTGGAAGAGTTCTGCAGCATCACTGATCACACTTATGACAAGGCAGAGGTTGTGAAGATGGAAGCTGACATACTCAAGTCCCTTAATTTTGAATTGGGCAGCCCTACTGTGAACACCTTTTTAAGGAGGTTTGCTGGTGTTGCTTCTAAGGACCAAAAAAATTCAAATTTGCAGATTGAATTTCTGGGCAGCTATATAGCTGAGCTAAGTTTGTTGGATTACAACTGTATAAGATTCTTGCCTTCTATTGTGGCTGCCTCGGTTATATTTCTTGCAAGATTCATTATCTGGCCTGATGTGCATCCTTGGACTTCATCCCTGTGTGAATGCTCGGGTTTCAAACCAGCTGAGTTGAAAGAATGTGTTCTCATATTGCATGAATTGTATTTGTTAAGAAAGGCAACATCCTTCCAAGCTGTTCGGGAGAAATACAAGCAGCATAAGTTCAAATGCGTGGCAAACCTACCTTCCTCTCCATATGTACCAAATCATTACTTTGAAGATCAGTGA 1065 0.4131 METRAAKRKANAANVVVVHNQHLKKKRIVLGELPNIPNLIHPATLNKHKEKLQCQKNPNIKKQALLKKTLSSPDANFDDPQIGEPYISDIYKYLRTMEMQRKRRPRTDYIEKVQREVTANMRGILVDWLVEVAEEYKLLSDTLHLSVSYIDRFLSVNPVTKSRLQLLGVSSMLIASKYEEITPPRVEEFCSITDHTYDKAEVVKMEADILKSLNFELGSPTVNTFLRRFAGVASKDQKNSNLQIEFLGSYIAELSLLDYNCIRFLPSIVAASVIFLARFIIWPDVHPWTSSLCECSGFKPAELKECVLILHELYLLRKATSFQAVREKYKQHKFKCVANLPSSPYVPNHYFEDQ* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1483 354 PANTHER CYCLIN-A3-1-RELATED 19 353 - -
Apr5g1483 354 Gene3D - 89 339 - -
Apr5g1483 354 PIRSF Cyclin_A_B_D_E 3 350 IPR039361 -
Apr5g1483 354 Pfam Cyclin, N-terminal domain 89 217 IPR006671 -
Apr5g1483 354 SUPERFAMILY Cyclin-like 78 217 IPR036915 -
Apr5g1483 354 CDD CYCLIN 121 210 IPR013763 -
Apr5g1483 354 Pfam Cyclin, C-terminal domain 220 342 IPR004367 -
Apr5g1483 354 ProSitePatterns Cyclins signature. 122 153 IPR006671 -
Apr5g1483 354 SMART cyclin_7 127 211 IPR013763 -
Apr5g1483 354 SMART cyclin_7 224 312 IPR013763 -
Apr5g1483 354 CDD CYCLIN 220 311 IPR013763 -
Apr5g1483 354 SMART Cyclin_C_2 220 343 IPR004367 -
Apr5g1483 354 PANTHER CYCLINS 19 353 IPR039361 -
Apr5g1483 354 SUPERFAMILY Cyclin-like 220 342 IPR036915 -
Apr5g1483 354 Gene3D - 105 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1483 Apr-Chr5 18814454 18816598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1483 1 353 Core Cell Cycle Gene Families AT1G47230 55.833 1.89e-140 401
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0386 9 5204422 5207050 Apr5g1483 5 18814454 18816598 PCT