Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1473 ATGGCGTCGAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAGGAATCTACAGACAGGATGGAATCTGCGTATAGAACATGGATTCATGCAACGAGAGATGCGTCCACCCCATGGAACCGTGATGAACTTCGCCGAGATCTGCATACTGCCCTTGGCACTGCTAAATGGCAGTTAGATGAATTTGAACGTGCGGTCAGGTCAAGTTATAGCAAAATTTCAAGTGAGGATACCAGAAATAGGCACCAAGATTTTATTGATGCCATCCTTGACAAGATTACAAAAGTTGAACACTTGTTACAAGAATCTGTTCATTTGGGTAGCAAGGCTTCTCTGCCTTGGATGGGTCTCGATGAAGGAGAACGGGATGAACTTGCATTGTTTCTTTCTGGAATGCCGGATTCTGGCGCCAGAAATCCCATTGAAAATATACAATTAAGTGATAAAGATTCATTAAGCAATTCGTCTGGAACACCAGAGGAGAAATCACATGGGCATCGCAGGGCAGCTAGTGCTGATGCTGATATTGGTGCTTGGAAAATTGCTGTTTCCGATAACGCGCCGCAATTGTGTTCTTCCAATGGTTTGTCTGGTCCTCTACATAGGGTAGCCAGTCTTTCTGGATTTTTTGGTTCCATGGAATCCATCTCTAAGTTGAAGTGGCCTAAGAATGGTTATAGAAAGCTTAAAGCGGTGAACCATCATCAAGAAATGGATAATGCACTGCTACCATCAACTGAATTGAATGGGGGCATCAATGCATACTTTGAAAAAGGTAAGAGCTGCCTTGACAATTGTGATGAATGTTATGATAAGCAATTCCACGGGTGGTACGGGGCTTTCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAATCGACCAGTTCAAATAACTGTCTGGATTGTTATTCTCCTTTGCTTGGTTGTTTTAATTGCTTTTTGCGCGATGTAA 978 0.4264 MASSFDRWEKDPFFNAAEEVQESTDRMESAYRTWIHATRDASTPWNRDELRRDLHTALGTAKWQLDEFERAVRSSYSKISSEDTRNRHQDFIDAILDKITKVEHLLQESVHLGSKASLPWMGLDEGERDELALFLSGMPDSGARNPIENIQLSDKDSLSNSSGTPEEKSHGHRRAASADADIGAWKIAVSDNAPQLCSSNGLSGPLHRVASLSGFFGSMESISKLKWPKNGYRKLKAVNHHQEMDNALLPSTELNGGINAYFEKGKSCLDNCDECYDKQFHGWYGAFQRQLQRSQYQMQYNRPVQITVWIVILLCLVVLIAFCAM* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1473 325 Gene3D - 9 110 - -
Apr5g1473 325 MobiDBLite consensus disorder prediction 144 176 - -
Apr5g1473 325 PANTHER EXPRESSED PROTEIN 1 324 - -
Apr5g1473 325 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Apr5g1473 325 MobiDBLite consensus disorder prediction 146 165 - -
Apr5g1473 325 PANTHER OS05G0443700 PROTEIN 1 324 - -
Apr5g1473 325 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr5g1473 Apr-Chr5 18749551 18752394 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1473 5 18749551 18752394 Apr5g1473 5 18749551 18752394 ECH
Apr9g0378 9 5091121 5093868 Apr5g1473 5 18749551 18752394 PCT