Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1471 ATGGTGAAGAGAGAGCACATTAACAAGATGAATGTGCTGATTATCAAGTGTCTTGAGATTGCTTTGCTGCTAGTTTTCTCTGGCAGACATATCATAGCAGAAAACTCGAAAAAGACATACATAATTCACATGGACAAGTTCAACATGCCAGCAAGTTTCAACGACCATCTTCTGTGGTATGATTCATCACTAAAATCAGTGTCAAATATTGCAGAGATGCTCTACACATACAAACACGTAGCTCATGGTTTCTCCACAAGGTTAACTACCCAAGAAGCAGACTTACTAGCAAAACATCCAGGGGTTCTCTCCATTATCCCTGAAGTTAGATACGAGCTTCACACAACTAGAACACCACAGTTCCTTGGATTGGAGAAAACCATCACTCTTTCACAGGCCAATGGAAAACAAAGCGAAGTGATTGTTGGAGTGCTAGACACTGGCGTATGGCCTGAGCTAAAAAGCTTCGATGACAGGGGGCTTGGGCCAGTACCCAGTAGTTGGAAAGGTTCGTGTGAGAAGGGTAAAAACTTCAACCCATCAAACTGTAACAGGAAACTTGTTGGTGCAAGGTTTTTCTCCAAAGGCTATGAGGAAGCTGTTGGACCCATTGATGAAAAGATAGAATCAAAGTCACCAAGGGATGATAGTGGCCACGGAAGTCACACTTCAACTACAGCAGCAGGTTCTGCAGTTGCAGGAGCAAGCCTTTTTGGTTTTGCTAATGGGACAGCGAGAGGAATGGCCACACAAGCCCGAGTTGCCGCTTACAAAGTGTGTTGGCTTGGTGGGTGCTATTCATCAGACATAATTGCTGGAATTGACAAGGCCATTCAAGATGGTGTCAACATCCTTTCCATGTCTATAGGGGGAGGTTTGGCGGATTATTACAAAGACGTTGTTGCAATCGGAACTTTTGCAGCCACAGCTCATGGAATACTAGTTTCTAATTCAGCAGGAAATAGTGGGCCTAGTGAATTAACTTTGTCTAATGTGGCTCCTTGGGCAATCACTGTGGGTGCTGGAACTATAGACCGTGACTTCCCTGCCTATATCACCCTTGGAAATGGGAATAGATACACTGGAGTGTCCCTTTACAATGGCAAACTGCCACCTAATTCTCCACTGCCAATTGTTTATGCTGGTAATACGACGAGTCAAAGCGAAGGAAATCTGTGCTACACTGGTAGCTTGATTCCTAAGAAAGTCTCGGGAAAAATCGTCATATGCGATCGAGGAGGAAATCCAAGGGTGGAAAAGAGTTTGGTGGTGAAGAATGCTGGAGGCATTGGGATGATATTGGCAAACAATGAAGAGTACGGGGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCTGCAGCAGCTTTGGGTTCAAAATTCAGCGATGAGATAAAGAAGTACGTTTTCTCAGCTCCCAAACCCACGGCTAAAATTGCATTTGGTGGCACCCAGATAGGAGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCCAGAGGACCAAATTTGGTCACACCACAATTACTCAAACCAGACCTGATAGCTCCAGGAGTGAACATCCTAGCTGGGTGGACTGGTGCAGTTGGACCTACTGGCTTAACCGTTGACACTAGGCATGTGAGCTTCAACATCATCTCAGGAACATCCATGTCCTGCCCCCATGTCAGTGGGTTAGCTGCCCTTCTTAAGGGAAATCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCTCTCATGACCACAGCCTACAGAACCTACAAAAATGGCCAAACAATAAAAGATGTTGCCACTGGCCTGCCAGCTACCCCATTTGATTATGGTGCTGGGCATGTTGATCCAGTAGCTGCTCTTGATCCTGGTCTTGTGTATGATTGTACTGTGGATGACTACTTGAGTTTCTTCTGTGCCTTGAACTACACTTCATTTCAAATAAAGCTTGTAGCAAGAAGAGATTTTTCCTGCAGCAAAGGGAAGAAATACAGAGTGGAAGATCTCAACTACCCATCTTTTGCTGTTCCTTTTGACAAACCAGCCACTGTCCAGTATAAAAGGGTTTTAACTAATGTCGGTACTCCAGGAACATATAAAGTTTCAGTTTTGCAGTCTCCCTTCGTCAAGACTGTGGTCGAACCACGAACGCTTAGCTTCAGGGAACTAAACGAGAAGAAGAGCTACACGGTTACGTTCACACCTTCTTCAAAGTCTTCTGAAACAACCAGCTTTGCTTATCTGGAATGGTCGGATGGGAAACATAAGGTTACTAGTCCCATTACTTTTAGCTGGAATTGA 2289 0.4509 MVKREHINKMNVLIIKCLEIALLLVFSGRHIIAENSKKTYIIHMDKFNMPASFNDHLLWYDSSLKSVSNIAEMLYTYKHVAHGFSTRLTTQEADLLAKHPGVLSIIPEVRYELHTTRTPQFLGLEKTITLSQANGKQSEVIVGVLDTGVWPELKSFDDRGLGPVPSSWKGSCEKGKNFNPSNCNRKLVGARFFSKGYEEAVGPIDEKIESKSPRDDSGHGSHTSTTAAGSAVAGASLFGFANGTARGMATQARVAAYKVCWLGGCYSSDIIAGIDKAIQDGVNILSMSIGGGLADYYKDVVAIGTFAATAHGILVSNSAGNSGPSELTLSNVAPWAITVGAGTIDRDFPAYITLGNGNRYTGVSLYNGKLPPNSPLPIVYAGNTTSQSEGNLCYTGSLIPKKVSGKIVICDRGGNPRVEKSLVVKNAGGIGMILANNEEYGEELVADSYLLPAAALGSKFSDEIKKYVFSAPKPTAKIAFGGTQIGVQPSPVVAAFSSRGPNLVTPQLLKPDLIAPGVNILAGWTGAVGPTGLTVDTRHVSFNIISGTSMSCPHVSGLAALLKGNHPEWSPAAIRSALMTTAYRTYKNGQTIKDVATGLPATPFDYGAGHVDPVAALDPGLVYDCTVDDYLSFFCALNYTSFQIKLVARRDFSCSKGKKYRVEDLNYPSFAVPFDKPATVQYKRVLTNVGTPGTYKVSVLQSPFVKTVVEPRTLSFRELNEKKSYTVTFTPSSKSSETTSFAYLEWSDGKHKVTSPITFSWN* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1471 762 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 760 - -
Apr5g1471 762 CDD PA_subtilisin_like 351 478 - -
Apr5g1471 762 Gene3D - 634 761 - -
Apr5g1471 762 MobiDBLite consensus disorder prediction 204 226 - -
Apr5g1471 762 SUPERFAMILY Subtilisin-like 113 621 IPR036852 GO:0004252|GO:0006508
Apr5g1471 762 Pfam Fibronectin type-III domain 664 758 IPR041469 -
Apr5g1471 762 Pfam Subtilase family 138 593 IPR000209 GO:0006508|GO:0008236
Apr5g1471 762 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Apr5g1471 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Apr5g1471 762 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Apr5g1471 762 Gene3D Peptidase S8/S53 domain 140 630 IPR036852 GO:0004252|GO:0006508
Apr5g1471 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 760 IPR045051 -
Apr5g1471 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 114 IPR037045 -
Apr5g1471 762 Gene3D - 345 486 - -
Apr5g1471 762 MobiDBLite consensus disorder prediction 204 218 - -
Apr5g1471 762 CDD Peptidases_S8_3 111 583 IPR034197 -
Apr5g1471 762 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Apr5g1471 762 SUPERFAMILY PA domain 386 439 IPR046450 -
Apr5g1471 762 ProSiteProfiles Serine proteases, subtilase domain profile. 110 617 - -
Apr5g1471 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Apr5g1471 762 Pfam PA domain 377 460 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1471 Apr-Chr5 18742846 18745409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1471 22 761 Subtilisin-like Serine Gene Family AT5G67360 65.188 0.0 993
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1471 5 18742846 18745409 Apr5g1471 5 18742846 18745409 ECH
Apr9g0377 9 5085951 5089321 Apr5g1471 5 18742846 18745409 PCT