Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1469 ATGGTAGCTGTAATTTCCACCCCCTCACAACCCGAAAACAGTTTCACACCTCGCACGCCCAAACCGCGACAAGCCACGTCATCATCATGCCATTCGCCGTTGAGCTCCAAAAGATCAGAGTCGGTGGAGCGAAACCGACCTCGCAGTGGCGCCACCGAAATGACACCGTCTGGAAAGATGCTCTTGACTTCCACCACAACTAGGAGCTTGTCCGTGTCGTTTCAGGGCGAGTCGTTCTGGATCACCGTTAGCAAATCCAAACCAATCAACGCTCCACCACCTAAACTCGCCGTGCCGAGAAAATCACCGTTCGATACTTCTTCGTCTCCACGAGCAGTTCTCAATAGCCGTGGCCAAGTTTCATTTTCACGTCCTCCATCACCGAACAAACTTCCCACAGTAGCATCTTCTTCTAGAGGCGTGAGCCCCTCTCGACTCAGAAATGGAGCGTCACCTACTCTCAATAATGCTTCAACCAGCAACCAACCTTCTATTTTGAGTTTTGCTGTTGATGTTAAGAGAGGGAGAATAGGAGAGAACCGAATTGTTGATGGACATTCGTTGAGACTTTTGTATAACAGACTCTTGCAATGGCGTTTTGTAAATGCCAGAGCAGATACTGACCTCTCTCTACAGAAATTCAATGCAGAGAATTGTCTCTATGATGCTTCGGCGTCTACCTGTAAACTACGAGAATCTGTTTGTGCCAAAAGAAGAGAGTTACAATTGCTGAAGCTACAGTTTAAGCTGACTTCCATCCTCAGGGAGCAAATGATGTATTTGGAAGATTGGGGTACTTTGGATTCGGTGTATAGTGGTTCACTTTCAGGAGCGATTCAAGCACTGAAGGCTAGCACTTTCCGGCTTCCTGTTGTTGATGTGGCAAAGGCTCATGGGCTGAAAGTGAAGGATGCGATTTGTTCAGCGGTGGATGTAATGCGGGCAATGGCAACCTCCTTATGCTTATTGTCACCAAAGATTCGTGTCAGAGCTACGACTAAGTTCTGGTTTCAAAATCTTGTTAAACTTGAATTAAGATATTTTGAGTATTTACCATCAAAAGGGTTAGACATTGGCAACATTGTGATGCCTTGGGCCTTGTGGCTTTCAGTTGGACATGTAAATTCATTGGTGGTTGAAGTTGCCAACTTGAGTGCAAAGGAGCATGTTTTGCTTGATGAATGCAAAGACCTTCTATCAAAGGTCAAAGCCATGCAGGTAAATTTTGTATCTAAAAGAGGCAGTGAAGCTTAA 1254 0.4561 MVAVISTPSQPENSFTPRTPKPRQATSSSCHSPLSSKRSESVERNRPRSGATEMTPSGKMLLTSTTTRSLSVSFQGESFWITVSKSKPINAPPPKLAVPRKSPFDTSSSPRAVLNSRGQVSFSRPPSPNKLPTVASSSRGVSPSRLRNGASPTLNNASTSNQPSILSFAVDVKRGRIGENRIVDGHSLRLLYNRLLQWRFVNARADTDLSLQKFNAENCLYDASASTCKLRESVCAKRRELQLLKLQFKLTSILREQMMYLEDWGTLDSVYSGSLSGAIQALKASTFRLPVVDVAKAHGLKVKDAICSAVDVMRAMATSLCLLSPKIRVRATTKFWFQNLVKLELRYFEYLPSKGLDIGNIVMPWALWLSVGHVNSLVVEVANLSAKEHVLLDECKDLLSKVKAMQVNFVSKRGSEA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1469 417 MobiDBLite consensus disorder prediction 48 63 - -
Apr5g1469 417 MobiDBLite consensus disorder prediction 1 36 - -
Apr5g1469 417 MobiDBLite consensus disorder prediction 1 63 - -
Apr5g1469 417 MobiDBLite consensus disorder prediction 85 158 - -
Apr5g1469 417 PANTHER AUGMIN FAMILY MEMBER 7 88 - -
Apr5g1469 417 PANTHER AUGMIN FAMILY MEMBER 92 327 - -
Apr5g1469 417 PANTHER AUGMIN FAMILY MEMBER 368 412 - -
Apr5g1469 417 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 92 327 - -
Apr5g1469 417 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 7 88 - -
Apr5g1469 417 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 368 412 - -
Apr5g1469 417 Pfam QWRF family 58 328 IPR007573 -
Apr5g1469 417 MobiDBLite consensus disorder prediction 102 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1469 Apr-Chr5 18720924 18723461 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1469 5 18720924 18723461 Apr5g1469 5 18720924 18723461 ECH
Apr9g0373 9 5015300 5021012 Apr5g1469 5 18720924 18723461 PCT