Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0973 ATGGAGGATGAGAAGAAGATCATCACTGGAGAGGGGATAGTGAAAGTGGAACCGAAACCCAGCAATGGTTTCACCTCAAAGGTTATTGATTTGTTGGAGAAGCTGGTTGTGAAGTTCTTGTATGATTCTTCACTGCCCCAGCACTACCTTTCTGGTAATTTTTCTCCTGTTCCAGATGAAACCCCTCCCACTATGGACCTTCCCGTTAAAGGGTACCTCCCGGATTGCTTGAATGGGGAGTTTGTCAGAGTTGGACCTAATCCAAAGTTTGCTCCTGTAGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGTATCAAAGATGGAAAGGCTACATATGTTTCCCGTTTTGTGAGAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCCAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTCGGACTTCTAATGGTTAACATACATATGCTGAGAATTAAATGGAAAGTACTCGATGTTTCTTATGGAACCTCAACAGCTAATACTGCTCTTGTATATCACCATGGGAAACTTCTAGCACTTTCAGAAGCAGATAAACCTTATGCTATTAAAGTCTTTGAAGATGGTGATTTGCAGACGCTTGGCATTCTAGATTATGACAAGAGATTGGGCCATTCCTTCACTGCTCATCCAAAAGTTGACCCGTATTCTGGGGAGATGTTTACATTTGGCTATTCACATACCCCACCATACATCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCCATAACAATATCAGATCCCATCATGATGCATGACTTTGCCATCACAGAGAATTATGCAATATTTATGGATCTTCCTTTGTATTTTAGGCCAAAGGAAATGGTGAAGAAAAAGACACTGATATTTTCATTTGATTCAACCAAGAAAGCTCGATTTGGTGTGCTACCTCGGTATGCTAAGGATGAAAAGCATATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAAGATGAAGTTGTTCTGATCACTTGCCGCCTTGAGAATCCAAATTTGGACATGGTCAGTGGGGCTGTCAAGGAAAAGCTTGAAAATTTCTCAAATGAGCTGTATGAGATGAGATTTAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCACCTGCTGTAGATTTTCCTAGGGTGAATGAAAGCTACACTGGAAGGAAGCAGCGATATGTATATGGAACCACATTAGACAGCATTGCAAAAGTTACTGGGATTATAAAATTTGATTTGCATGCTGAATCAGATTCTGGAAAAACAAAGCTTGAGGTTGGAGGAAATGTTCAGGGTCTGTATGACTTGGGACCTGGGCAGTTTGGCTCTGAGGCTATTTATGTCCCGCGTGTCCCTGGCACCAATTCCGAAGAAGATGATGGATACCTTATCTTTTTTGTGCATGATGAGAATACCGGAAAATCGTTCGTCCACGTTATAGATGCAAAAACAATGTCAGCAGATCCTGTCGCGGTTGTTGAATTGCCTCATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGAACAACTGCAAGAACAGGGGAAACTGTGA 1632 0.413 MEDEKKIITGEGIVKVEPKPSNGFTSKVIDLLEKLVVKFLYDSSLPQHYLSGNFSPVPDETPPTMDLPVKGYLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNIHMLRIKWKVLDVSYGTSTANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGILDYDKRLGHSFTAHPKVDPYSGEMFTFGYSHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAIFMDLPLYFRPKEMVKKKTLIFSFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPNLDMVSGAVKEKLENFSNELYEMRFNMKTGEASQKKLSAPAVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAESDSGKTKLEVGGNVQGLYDLGPGQFGSEAIYVPRVPGTNSEEDDGYLIFFVHDENTGKSFVHVIDAKTMSADPVAVVELPHRVPYGFHAFFVTEEQLQEQGKL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0973 543 Pfam Retinal pigment epithelial membrane protein 54 532 IPR004294 GO:0016702
Apr5g0973 543 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 3 539 - -
Apr5g0973 543 PANTHER BETA-CAROTENE DIOXYGENASE 3 539 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0973 Apr-Chr5 14268058 14272498 Dispersed