Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0965 ATGGCTACCCTCCTGGTCATTTTCTTGGCCTTGTCCTCATTAGGAAATGCACTTTCTACCTCATCCTTCATTCCCAAAGACAATTTTCTGATTGATTGTGGTTCAGATAATGCAGCCACACTCCCTGATGGAAGAGAATTCAAATCAGACCCTCAAGCAAGATCCTTCTTGCAAGCCAATGATGAGTACATGGTCTCAGCAGATGGTGTAAATGTTTCCTCCTATCCCATATATTCAAATGCAAGGATCTTCATTCAGGAAGCCAAGTATTCATTCCATTTGGTTCAACCAGGATTTCATTGGATCAGGCTCCATTTCTATCCCATCAAGAACAATGTCTTTGATCTTCAAAAGGCCACTTTCTCTGTCTTCACAGACACATATGTTCTCCTACACAGCTTCAATGTTAACAACACTGAAAAGGCAATCCTCAAGGAGTACCTCATCAATGCAACTGAACCTCAATTAACCTTGGCATTCATTCCCCTCAAGAATTCAGCTGCATTCATCAATGCCATTGAGGTTGTTTCAGCTCCTGATGACTTGATCTTTGACACTGGATCCGGCCTTTTCCCAGTCAGCGAGTTTGGCGGCCTCACGGCTTATGGTTTTGAAGCTGTTTACAGGCTCAACAATGGAGGGCCCTTGATCACCTCATCAAATGACACCCTTGGAAGAACTTGGGAACCTGATGACACTTACCTCACAAACAAGAACTTGGCAAAGAATGCCTCTGTGGCTACCAATGCCATTAAGTTCCCCAAAGACAATCCAACAATTTCCCCTCTCATTGCACCACAAACTGTGTACTCCTCTGTCACTGAAATGGGTGATGCTGGTGTCAATCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGATGATGCTTTTAGCTACCTTGTTAGATTACATTTCTGTGACATTGTGAGCAAGGGCCTCAATGAACTCTACTTTAATGTCTATGTTAATGGGAAGATGGCAATTTCTAACTTGGATTTGTCAGCTATCACTGGAGCCTTGGCAACCCCATATTACAAAGACATTGTGGTCAATGCAACATTGATGTCTGAAGGACTAACAGTTCAGGTAGGTCCAGCAAATGCGGATGGCGGAAATGCCAATGCCATTTTGAATGGTGTGGAGGTCTTGAAGATGAGCAACTCTGTCAACAGTTTAGATGGAGAATTTGGAGTTGATGGAAGAAGGATAGGTGGTTCTAACCGTGGCACGGTGGCAGCAGTTGGATTTGCCATGATGTTTGGAGCTTTTGTGGGTCTTGGTGCTATGGTGATCAAGTGGCACAAGAGGCCTCAAGACTGGCAAAAGAGGAATAGCTTCTCTTCATGGTTACTGCCTCTGCATGCTGGTGACACAAGCTTCATGAGCAGCAAGAACTCAATGGGAAAGAGCAATATCTTCTCCTCATCAATGGGATTAGGAAGGTACTTCTCCTTTTCAGAACTGCAGGAAGCAACCAAGAACTTTGACTCCAAGAACATCATTGGTGTTGGTGGATTTGGCAATGTCTATTTAGGTGTGATTGATGAGGGGACTCAAGTGGCAGTCAAGAGAGGAAACCCACAATCAGAACAAGGCATAAATGAATTCCAAACTGAGATTCAAATGTTGTCCAAGCTCAGGCACAGGCACCTGGTTTCCTTGATTGGATACTGTGATGAGAATGATGAGATGATCCTGGTTTATGAGTACATGCCTAGTGGACACTTCAGAGACCACCTCTATGGAAAGAACATGACCATGACTCCTCTTTCATGGAAGCAAAGGTTAGAGATATGCATTGGAGCAGCTCGCGGTCTTCACTACCTTCACACCGGCACTGCACAAGGCATCATTCACCGCGATGTTAAGACCACCAACATCTTGCTTGATGAGAATTTGACAGCCAAGGTTTCTGATTTTGGACTTTCAAAGGATGCACCAATGGGGCAGGGTCATGTTAGTACTGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCCGGAGGCAGCAACTAACTGAAAAGTCTGATGTGTACTCATTTGGGGTAGTCCTGCTTGAGGCACTATGTGCAAGGCCAGCCATTAACCCACAGTTGCCCAGGGAACAAGTAAACTTGGCTGATTGGGCAATGCAATGGAAGAGGAAGGGCTTGCTTGACAAGATCATTGACCCTCACCTTGTTGGTTCCATCAATCCTGAGTCTATGAAGAAGTTTGCTGAGGCTGCTGAAAAGTGCTTGGCTGATCATGGAGTTGATAGGCCTTCAATGGGAGATGTTCTTTGGAACCTGGAGTATGCATTGCAGCTTCAAGAAGCCTTCACGCAAGGAAAGGCTGAGGATGAGATCAAGTCTTCTGCAGCTGTTCCTACTTCACCAGCTCCACAAACACCTTCCACCCCCTCTGATGCTCCAGAAGTCATTAATGCTCCACCAGTCAATGATGCTCCACCTGTGAATAATGCTCCATCAGTGAACAACACTCCAGCCGAAGCCGAAGCCGAATCCGAAGCCCGTGCTGTTGATGACCATTCTGGAATGTTTGCCCAGTTTGATCGCCTTAATGGCAGGTGA 2583 0.4533 MATLLVIFLALSSLGNALSTSSFIPKDNFLIDCGSDNAATLPDGREFKSDPQARSFLQANDEYMVSADGVNVSSYPIYSNARIFIQEAKYSFHLVQPGFHWIRLHFYPIKNNVFDLQKATFSVFTDTYVLLHSFNVNNTEKAILKEYLINATEPQLTLAFIPLKNSAAFINAIEVVSAPDDLIFDTGSGLFPVSEFGGLTAYGFEAVYRLNNGGPLITSSNDTLGRTWEPDDTYLTNKNLAKNASVATNAIKFPKDNPTISPLIAPQTVYSSVTEMGDAGVNQPNFNVSWKFDVDDAFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSAITGALATPYYKDIVVNATLMSEGLTVQVGPANADGGNANAILNGVEVLKMSNSVNSLDGEFGVDGRRIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFMSSKNSMGKSNIFSSSMGLGRYFSFSELQEATKNFDSKNIIGVGGFGNVYLGVIDEGTQVAVKRGNPQSEQGINEFQTEIQMLSKLRHRHLVSLIGYCDENDEMILVYEYMPSGHFRDHLYGKNMTMTPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENLTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPHLVGSINPESMKKFAEAAEKCLADHGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDEIKSSAAVPTSPAPQTPSTPSDAPEVINAPPVNDAPPVNNAPSVNNTPAEAEAESEARAVDDHSGMFAQFDRLNGR* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0965 860 CDD STKc_IRAK 502 768 - -
Apr5g0965 860 Gene3D - 204 388 - -
Apr5g0965 860 Gene3D - 28 179 - -
Apr5g0965 860 PANTHER BNAC03G60370D PROTEIN 15 807 - -
Apr5g0965 860 SMART serkin_6 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0965 860 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Apr5g0965 860 Gene3D Transferase(Phosphotransferase) domain 1 572 792 - -
Apr5g0965 860 PANTHER OS07G0166700 PROTEIN 15 807 IPR045272 GO:0004714|GO:0006468
Apr5g0965 860 Pfam Malectin-like domain 31 385 IPR024788 -
Apr5g0965 860 ProSiteProfiles Protein kinase domain profile. 496 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0965 860 SUPERFAMILY Protein kinase-like (PK-like) 479 765 IPR011009 -
Apr5g0965 860 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Apr5g0965 860 MobiDBLite consensus disorder prediction 782 860 - -
Apr5g0965 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Apr5g0965 860 Pfam Protein tyrosine and serine/threonine kinase 499 760 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0965 Apr-Chr5 14185302 14187884 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Apr5g0965 Malectin_like 1.6e-34 CL0202