Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0962 ATGGTGAAGGACACAACCTATTACGACGTATTAGGGGTCAATGTTGATGCATCTGCTGCAGATATCAAGAAGGCTTATTATATCAAGGCAAGAATAGTTCACCCTGATAAAAATCCTGGAGATCCGAAGGCTGCAGAAAATTTTCAGATGCTTGGTGAGGCTTACCAGGTTTTAAGTGATCCAGAGAAGCGTGAAGCATATGATAAGCATGGAAAGGAGGGAATACAACAAGATTCCATGATGGACCCTGCAACTGTGTTTGGAATGCTTTTTGGCAGTGAATTTTTTGAAGAATATATTGGAAAACTAGCGCTAGCTTCTTTAGCATCTATAGAAATGGATGAAAATTCACAGGATCCTGAAGTTCAAAGGCAGAAAATTCAGGAAAAGATGAAGGCATGGCAGAATGAAAGGGAGCAGAAGCTGACATCAATTCTGAAAGATCGCCTTCAACCATTTGTTGATGGGCGAGAAGATGAATTTACAGCATGGGCGAACTCAGAAGCATGTAATCTTTCACAAGCTGCTTTTGGAGAGGCCATGCTACACACAATTGGTTATATCTACACACGAAAAGCTGCAAAAGAACTTGGAAAGGATATACGATATATGAATGTTCCCTTTTTAGCAGAGTGGGTACGAGACAAAGGACACCGGATAAAATCACAAGTGACAGCAGCCTCAGGAGCTGTGTCCCTAATTCAAATACAAGAAGAGCTGAAGAAGCTAAACCAAGGAGAAAACAAAGATGAAAACATAGTTAAAGCTATTGAAGATAAGAAGGATGCTATGCTTAATTCCCTGTGGCAAATCAACGTGATAGATATTGAATCAACTCTGTCACATGTCTGCCAAGCAGTTCTTAGAGATCCTAGCGCCTCCAAAGATGTTCTGAGGTCTCGGGCTCATGCATTAAAAAAGTTAGGAACTATCTTTCAAGGTGCTAAGGCTGCTTACAGCAGAGAAAATAGCCTTCGCCGAGAAAGCAACAAATCAGTTGGTGGCACTTCCTCATCATAG 1020 0.4118 MVKDTTYYDVLGVNVDASAADIKKAYYIKARIVHPDKNPGDPKAAENFQMLGEAYQVLSDPEKREAYDKHGKEGIQQDSMMDPATVFGMLFGSEFFEEYIGKLALASLASIEMDENSQDPEVQRQKIQEKMKAWQNEREQKLTSILKDRLQPFVDGREDEFTAWANSEACNLSQAAFGEAMLHTIGYIYTRKAAKELGKDIRYMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENKDENIVKAIEDKKDAMLNSLWQINVIDIESTLSHVCQAVLRDPSASKDVLRSRAHALKKLGTIFQGAKAAYSRENSLRRESNKSVGGTSSS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0962 339 Pfam X-domain of DnaJ-containing 135 328 IPR026894 -
Apr5g0962 339 SMART dnaj_3 5 63 IPR001623 -
Apr5g0962 339 CDD DnaJ 6 60 IPR001623 -
Apr5g0962 339 PRINTS DnaJ domain signature 8 26 IPR001623 -
Apr5g0962 339 PRINTS DnaJ domain signature 26 41 IPR001623 -
Apr5g0962 339 PRINTS DnaJ domain signature 43 63 IPR001623 -
Apr5g0962 339 PRINTS DnaJ domain signature 63 82 IPR001623 -
Apr5g0962 339 PANTHER BNAA01G05380D PROTEIN 1 328 - -
Apr5g0962 339 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 328 - -
Apr5g0962 339 SUPERFAMILY Chaperone J-domain 2 100 IPR036869 -
Apr5g0962 339 Pfam DnaJ domain 6 68 IPR001623 -
Apr5g0962 339 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Apr5g0962 339 Coils Coil 124 144 - -
Apr5g0962 339 Gene3D DnaJ domain 1 87 IPR036869 -
Apr5g0962 339 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0962 Apr-Chr5 14135482 14142479 Transposed