Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0949 ATGGGAACAATGCAACATTATTCATCACTCATTCTTGTCTTGCTATGCCTCTTCAACACCCCTTTCATGGAGGCTCTGAATGGAGGTTTCAGTGTGGAAATCATCCACCGTGACTCATCAAGATCACCATTCTATAATCTAACAGAAACCCATTTCCAAAGAGTTTCCAATGCTGTGCGTCGTTCAATAAACCGTGCTAATCATTTGGAGAAATCTTTTGTTTCTGGAAACACAGTTGAAGCCACTGTTGCACCAGATGATGGTGGTGCTTATCTCCTGAACTATTCAATTGGAACACCACCATTCCAACTCTACGGTATTGTAGATACAGGAAGTGGCCTTGTTTGGCAGCAATGCCAACCTTGCAAACGATGTTTCAACCAAACCACTCCTATTTTTAACCTTTCAAAATCCAACACATACAAAACCCTTCCTTGTTCTTCTGCTATATGTAAATCTGTGAAAGACACATTTTGCAACCCCAATAATGACCAAAACTGTGGATATTATATTGACTATGCAGATGGGTCATACTCACAAGGAGATATTAGTGTGGATACCCTCACTTTTGGCTCCATCAATGGCTGTGTTAAATTTCCAAATATTGTGATAGGTTGTGGAAGGAAAAATGCCGTGTCCTTTGAGAAGGGTAAAGGCTCAGGCATAGTTGGATTTGGAGGTGGACCTGTGTCCCTTATCTCTCAGTTGAGTTCTTCAATAGAAGCCAAATTCTCTTATTGTTTGGTACCAATGCTTTCACAATCAAGCAAACTCAATTTTGGAGATGCTGCTGTGGTTTCTGGTGATGGAACTGTCTCAACTCCCATAGTCCCACAAAACCCAAAAGTATTTTACCATTTAACGTTGGAAGCACTTAGTGTGCAAAACAATAGAATCGAGTTTGGAAGATCCTCTTCTAAATCTGATAGTACAGAAGGAAATATCATAATTGACTCGGGTTCAACGCTTTCTGTTTTACCAGATGATGTTTACTCAAAGTTAGAATCAGCAGTGGCAAATGTGGTCAAGTTAGAGCGTGCTAAAGACCCTTTGAAACAATTGAACCTTTGCTACAAATCAAGGTTAGAAAAACTTGATGCACCAATAATCACTGCACATTTTAGAGGTGCAGATGTCAAATTGAATGCTATCAACACCTTTCTTCAAGTTGATGATGAAATTGTATGCTTGGCATTCTTTTCTTCTCCAAAACTTGCCATCTTTGGGAACGTCGCACAACAAAACTTTTTGGTTGGCTATGATCTTCAAAAGAAAACCGTCTCCTTTAAGCCCACAGACTGCGCAAAGCAGTGA 1314 0.3995 MGTMQHYSSLILVLLCLFNTPFMEALNGGFSVEIIHRDSSRSPFYNLTETHFQRVSNAVRRSINRANHLEKSFVSGNTVEATVAPDDGGAYLLNYSIGTPPFQLYGIVDTGSGLVWQQCQPCKRCFNQTTPIFNLSKSNTYKTLPCSSAICKSVKDTFCNPNNDQNCGYYIDYADGSYSQGDISVDTLTFGSINGCVKFPNIVIGCGRKNAVSFEKGKGSGIVGFGGGPVSLISQLSSSIEAKFSYCLVPMLSQSSKLNFGDAAVVSGDGTVSTPIVPQNPKVFYHLTLEALSVQNNRIEFGRSSSKSDSTEGNIIIDSGSTLSVLPDDVYSKLESAVANVVKLERAKDPLKQLNLCYKSRLEKLDAPIITAHFRGADVKLNAINTFLQVDDEIVCLAFFSSPKLAIFGNVAQQNFLVGYDLQKKTVSFKPTDCAKQ* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0949 437 SUPERFAMILY Acid proteases 87 434 IPR021109 -
Apr5g0949 437 CDD pepsin_A_like_plant 90 434 IPR034161 -
Apr5g0949 437 Gene3D Acid Proteases 67 260 IPR021109 -
Apr5g0949 437 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 315 326 IPR001969 GO:0004190|GO:0006508
Apr5g0949 437 Pfam Xylanase inhibitor N-terminal 91 262 IPR032861 -
Apr5g0949 437 PANTHER OS07G0603500 PROTEIN-RELATED 8 435 - -
Apr5g0949 437 ProSiteProfiles Peptidase family A1 domain profile. 91 430 IPR033121 -
Apr5g0949 437 Pfam Xylanase inhibitor C-terminal 285 430 IPR032799 -
Apr5g0949 437 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 8 435 - -
Apr5g0949 437 Gene3D Acid Proteases 261 437 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0949 Apr-Chr5 13991864 13993177 Dispersed/Tandem