Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g0942 | ATGATGTACAATGATCCCCAGCACCAACACCAGCACCAACACCAGCACCAGTACCAACAGCAACAACAGCAGCAACATTTTCACCATCAGCCACCGGGCCCGGAGTTCCACCGTGGACCGCCGCCGCCGTCGCAGCCGCCGCCAGTGATGCGCCAGCCTTCCGCTTCGTCAACCAATCTCGCTCCCGAGTTTCACCATCTCGGTCCCGGAGGCCCTCCTCCTCCTCATTACGATGTTCACAGTGACAGCCATGGTGCAAAAAGAATACGGAAACTCACTCAAAGAAAGGCAGTTGATTATACAAGCACAGTTGTGCGATATATGCAGATTCGTATGTGGCAGCGGGATTCAAGGGATAGAACAGTACTGCAACCTACCCCAGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAATCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGTCCTATTAATCGGGTTCTTTGGACTCCAACAGGCCGGCGTCTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCTCATGACCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTTTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAATAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGTTTCTGTAGGACAGATTTGAAGTTCTGTTCATGTTCTGATGATACCACAGTTAAAGTTTGGGACTTTGCACGCTGTCAAGAAGAGTGTTCATTAACTGGCCATGGTTGGGATGTGAAGAGTGTTGATTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAAACAGGGAGAGAGCTTTGCTCATTTCATGGCCACAAAAATACTGTGCTCTGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTAACAGCTTCAAAGGATCAGATAATAAAGCTTTATGACATAAGAGCTATGAAGGAGCTTGAATCATTCCGTGGACATCGCAAAGATGTTACTGCTTTGGCATGGCATCCATTCCATGAAGAGTACTTTGTCAGTGGGAGTTATGACGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCACAAATTGAGATTTCCAATGCTCATGATAACAATGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTATGCAGTGGCAGCAGTGACCATACAACAAAGTTTTGGTGCCGAAACAGGCCAGGAGACACTGCTCGTGATAGATTTAACACTGGCATGCAAGGATATGCTGACCAAAATCCTGTTGCTGGTCGTGTGGGTGGTAATTTTCCGATAGCTGAAGGCCCAACAACTCCAGGACCATTTGCCCCTGGTTTGACTCGAAATGAGGGTACCATTCCAGGTGTTGGAGTTGCAATGCCCTTGTCTATCCCTTCTCTTGACATGTCTCAAGGGGAGCAGAAGCAGCCGCTTCCTGTTTCCATGGGTGCTCCTCCTCTTCCCCCAGGTCCACATCCCTCTCTTCTTACTGCCAACCAACAGCAACCATACCAGCAGAATCCTCAGCAGATACCACAACATCAACACCAAGCTCTACCGCAACAGATGGGTCCTTTGCCTATACCTCCAAATATGCCACAGCTACAGCACCCTTCCCATTCACCCTTGGTCCCTCATCAACATTTGCCTCGCCCACCACCCCAGATGCCTATTGGAATGCCAGGATCTCTACCAGTGCCTACATCACATCCAATGCCAATGCCAGGTCCAATGGGGATGCAGGGGGCAATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTATGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCCACAAGTGGAGGCCCACCACTTGGTGGTTTTCCGAGCAACTTGCCTAATATGCAAGGGCCGTCAAATACCAATTATCCTCAAGGTGGTTCATTCAACAGACCTCAAGGTGGCCAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAGTCTGGGATTCCTCCAAGTGCACAGCCAGGGGCTTCACACTCTCAAATGCCTCAATAG | 2175 | 0.4759 | MMYNDPQHQHQHQHQHQYQQQQQQQHFHHQPPGPEFHRGPPPPSQPPPVMRQPSASSTNLAPEFHHLGPGGPPPPHYDVHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTARDRFNTGMQGYADQNPVAGRVGGNFPIAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMSQGEQKQPLPVSMGAPPLPPGPHPSLLTANQQQPYQQNPQQIPQHQHQALPQQMGPLPIPPNMPQLQHPSHSPLVPHQHLPRPPPQMPIGMPGSLPVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPSNLPNMQGPSNTNYPQGGSFNRPQGGQMPLMQGYNPYQSGNQSGIPPSAQPGASHSQMPQ* | 725 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g0942 | 724 | PANTHER | WD40 REPEAT PROTEIN | 76 | 716 | IPR045245 | GO:0031124 | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 324 | 365 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Gene3D | - | 315 | 453 | IPR015943 | GO:0005515 | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 240 | 272 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 198 | 230 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 282 | 319 | - | - | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 196 | 229 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 362 | 398 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 412 | 441 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 241 | 272 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 319 | 356 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | Pfam | WD domain, G-beta repeat | 280 | 314 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 282 | 323 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | CDD | WD40 | 160 | 441 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 410 | 441 | - | - | |
| Apr5g0942 | 724 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 301 | 315 | IPR019775 | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 366 | 398 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 513 | 590 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 366 | 398 | - | - | |
| Apr5g0942 | 724 | Gene3D | - | 106 | 314 | IPR015943 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 359 | 399 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 317 | 356 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 144 | 188 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 233 | 272 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 191 | 230 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 275 | 314 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SMART | WD40_4 | 402 | 442 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 667 | 724 | - | - | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 650 | 724 | - | - | |
| Apr5g0942 | 724 | PRINTS | G protein beta WD-40 repeat signature | 259 | 273 | IPR020472 | - | |
| Apr5g0942 | 724 | PRINTS | G protein beta WD-40 repeat signature | 301 | 315 | IPR020472 | - | |
| Apr5g0942 | 724 | PRINTS | G protein beta WD-40 repeat signature | 429 | 443 | IPR020472 | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 410 | 441 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 34 | 50 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 324 | 358 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 240 | 272 | - | - | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 156 | 188 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | SUPERFAMILY | WD40 repeat-like | 152 | 441 | IPR036322 | GO:0005515 | |
| Apr5g0942 | 724 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 198 | 230 | IPR001680 | GO:0005515 | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 539 | 565 | - | - | |
| Apr5g0942 | 724 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |