Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0940 ATGGGTATGGCTGCAGGGGCCCAGTTCCATGTTTTGGCTGTTGATGACAGTCTTATTGATAGAATGTTAATTGAGAGGCTCCTGAAAACCTCTTCCTTCCATGTTACTACAGTGGACTCTGCCAGTAAGGCTTTAAAATTTCTTGGTTTGATGGAAGATGAATTAAGGACTCTAGACACTCCTGTTGCTTCAGAAATTCATCAGGATGAGGAAGTAAACCTGATTATAACAGATTACTGTATGCCAGGAATGACTGGCTATGACCTGCTGAGAAAAATCAAGGAATCAAAATCTCTGAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTACCATCAAGGATTAACAGATGCTTGGAAGAGGGAGCTGAAGAATTCTTTTTGAAACCAGTTCAACAATCAGATGTTAATAAGCTCAAGCCCCATTTGTTGAAATCAAGAGTTAAGGAAGAGCAAGCCCAACCCTTCAGTAACAAAAGAAAAGACATGGAAGAAAGCCACACTCCAAACAAAACCAGATTAAAATGTAGCAGTTAA 540 0.3981 MGMAAGAQFHVLAVDDSLIDRMLIERLLKTSSFHVTTVDSASKALKFLGLMEDELRTLDTPVASEIHQDEEVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSRVKEEQAQPFSNKRKDMEESHTPNKTRLKCSS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0940 179 SUPERFAMILY CheY-like 9 148 IPR011006 -
Apr5g0940 179 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Apr5g0940 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 175 IPR045279 GO:0009736
Apr5g0940 179 SMART REC_2 9 144 IPR001789 GO:0000160
Apr5g0940 179 MobiDBLite consensus disorder prediction 148 179 - -
Apr5g0940 179 Gene3D - 10 176 - -
Apr5g0940 179 CDD REC_typeA_ARR 11 140 - -
Apr5g0940 179 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Apr5g0940 179 MobiDBLite consensus disorder prediction 148 172 - -
Apr5g0940 179 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0940 Apr-Chr5 13870877 13872352 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr5g0940 Response_reg 2.1e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0940 5 13870877 13872352 Apr2g0804 2 11401909 11405087 PCT