Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g0938 | ATGGCAGCGAGTGCTGTTTACTTCGTTGCCATCGGAGAACCTCGTTGGTCGCCACCACACATTGCTCTTCTCAGATTTTTCAATCGCACCCTTCTTTCCTTCAAACGGCACGTCGCTCACATTCTCAACGCCCAGCACGACACTGTCGCACATGCCAGGATTTGCTGTCGAGTGGATTTGGCTAGTGGGGAGAAGTGCGAACTAAATGCAGGAGATTGTCCGCGTAACGGCAAGAGTTTCGGTGCTGATGAAAAGGGCCGACACGCCGTTTTTAATGTGTTGGATATTATACTAAAGGATAGTTTGGAACGATTGAAGATGATGAGGGAAAACATATCATTGGTAAAGATAGGTCTTCAGGGATATGCATGTGAATTTAACTACACTGAACATACCGCCGCTATTAGGTGTATGTGCTTGGAAGGTAAGTTGGGAGCAGCTCTATGGCTTCGGAGAAAAATGGCAGGGAAAGGTGTTCTTCCTGATGTGTTTACCCACAACCATATTGTAAATGGGCTGTGCAAAATGGTTCTCTTGAAGAAGGCAGATTGGCTTGTTAGACAGATGTTAGAATTTGGTCCTCATCCCAACTGTGCCACTTACAACACTGTAATTAAGGGGTATTGTGCGGTTAATAATGTGAATAAAGCTTTGTATCTGTTCTCCACCATGGCCAATAATGGGGTTCTGCCAAACAGCATTACTTGTAACATACTGGTACATGCATTGTGTGAGAAAGGTCTTCTGAAGCAAGCCAAAAAGATGCTTGAAGAAATATTAAATGATGATGACGAGAAAGATATACCTGATTTAGTTACATCTACTATATTTATGGATAGTTACTTCAAGAGTGGAGCAATTATTCAGGCTCTTGGTCTTTGGAATCAGATGCTTCAAAAGTGTAGAAAAGTAGATGCTGTAGCTTATAATGTTCTTATCAATGGATTTTGCAAGAGTCAACATATGAATCTTGCACATGGATATGTTTGTGAGATGTTTAAGAAGGGTTTACTTCCTGATGCTTTTACTTATAATATTCTTATTGGTGCTCTTTGCAAGGAAGGCAAAACTACTGAGGCTTTTTATACACTTGGAGTTATGTCTAACATGGGAATTATGCCCGATCAAATTACATACCAGATTGTGATTCGAGGCCTTTGTTTTGATGGAGATATTGTTAGAGTAAAAAACTTGCTACGGTGTATGTTGAACAATTTAATGGTGCCTGGACCTATAATATGGAACCTTATAATTGACTTATATGGAAGATGTAAAGATCTTAATAGTGCATTTTTTACAAGAGATCAGATGCTGGCTTTTGGTGTTCTCCCTAATGTATTTACTTATAATGCTTTAATTCTTGCACAAGTGAAATGTGAAAATTTTTATGGTGCTTGCTCTCTGAAGGAAGAGATGATTTCAAAAGGTCTCTGCCCTGATGTGGTTACTTATAATTTGTTGATAGGTGCTGCTTGTAATTTAGGACGTCTTGATTTTGCTCTTCAAGTGTACAATGAGATGGTGCAGATGGGTTATGAACCAGATTTAATAACTTATACTGAACTTGTTAGGGGATTCTGCATTAGAGGTAACATGAAAGAAGCAGAAGAGCTCTATGCTAAAATACTAAAATCTGGTTTATTGAATGATCATGTTCCAGTTCAGATTCTTTTTAATAAGTACTGCAAATTGGGAGAACCAGTTAAAGCATTTAACTTCTATCAAGACTGGTTGGCAAGTAAGCGGGGTAGTTATCCTTGCTAA | 1764 | 0.3906 | MAASAVYFVAIGEPRWSPPHIALLRFFNRTLLSFKRHVAHILNAQHDTVAHARICCRVDLASGEKCELNAGDCPRNGKSFGADEKGRHAVFNVLDIILKDSLERLKMMRENISLVKIGLQGYACEFNYTEHTAAIRCMCLEGKLGAALWLRRKMAGKGVLPDVFTHNHIVNGLCKMVLLKKADWLVRQMLEFGPHPNCATYNTVIKGYCAVNNVNKALYLFSTMANNGVLPNSITCNILVHALCEKGLLKQAKKMLEEILNDDDEKDIPDLVTSTIFMDSYFKSGAIIQALGLWNQMLQKCRKVDAVAYNVLINGFCKSQHMNLAHGYVCEMFKKGLLPDAFTYNILIGALCKEGKTTEAFYTLGVMSNMGIMPDQITYQIVIRGLCFDGDIVRVKNLLRCMLNNLMVPGPIIWNLIIDLYGRCKDLNSAFFTRDQMLAFGVLPNVFTYNALILAQVKCENFYGACSLKEEMISKGLCPDVVTYNLLIGAACNLGRLDFALQVYNEMVQMGYEPDLITYTELVRGFCIRGNMKEAEELYAKILKSGLLNDHVPVQILFNKYCKLGEPVKAFNFYQDWLASKRGSYPC* | 588 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g0938 | 587 | Gene3D | Tetratricopeptide repeat domain | 330 | 407 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | Gene3D | Tetratricopeptide repeat domain | 85 | 190 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | Gene3D | Tetratricopeptide repeat domain | 262 | 329 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | Gene3D | Tetratricopeptide repeat domain | 191 | 261 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 232 | 266 | IPR002885 | - | |
| Apr5g0938 | 587 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 18 | 581 | - | - | |
| Apr5g0938 | 587 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 18 | 581 | - | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat family | 479 | 527 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat family | 305 | 353 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat family | 196 | 244 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat | 157 | 189 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 445 | 479 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 197 | 231 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 482 | 515 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 307 | 341 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 342 | 375 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 234 | 261 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 413 | 446 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 517 | 547 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 200 | 232 | IPR002885 | - | |
| Apr5g0938 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 447 | 481 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | Pentatricopeptide repeat domain | 415 | 455 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 515 | 549 | IPR002885 | - | |
| Apr5g0938 | 587 | Gene3D | Tetratricopeptide repeat domain | 413 | 584 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 305 | 339 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 410 | 444 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat | 272 | 300 | IPR002885 | - | |
| Apr5g0938 | 587 | Pfam | PPR repeat | 377 | 404 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 480 | 514 | IPR002885 | - | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 340 | 374 | IPR002885 | - | |
| Apr5g0938 | 587 | SUPERFAMILY | TPR-like | 179 | 578 | IPR011990 | GO:0005515 | |
| Apr5g0938 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 162 | 196 | IPR002885 | - |