Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0934 ATGATGGCTTCTTCCTCTTCTTCTTCTTTGGTTGTTGGGCCACATCATCTTACTACACGGAATGGTTACAGGGTTTGGGAGGATCCTTCTTTCATCAAGTGGAGGAAAAGAGACCCTCATGTTACTTTGCATTCCCATGATTCCGTTGAAGTTCCCTCAAATTGGCAGTTGCATGGATTTGACTGTCCTATATATACAAACGTGCAATATCCATTTCCTCTAGATCCTCCTTTTGTTCCTGTGGAAAATCCTACTGGCTGCTACAGAGTGTATTTCGACATTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTGCATTTTGAAGCAGTTGATTCTGCCTTCTGTGCATGGATAAATGGACATCCTATAGGATATAGCCAAGACAGCAGACTACCTGCAGAGTTTGAAATCACTGATTTTTGTCATCCATGTGGTTCGGACTGTAAGAATGTTTTAGCTGTTCAAGTATTTAGATGGAGTGATGGTTCTTACCTTGAAGACCAGGACCAGTGGCGGTTATCTGGCATCCACCGTGATGTTCTTCTTTTGGCAAAGCCAGAGGTATTTGTTACTGACTATTTTTTCAAATCAAACCTTGCTGAAGATTTTTCTTATGCAGAGATACTGGTTGAAGTAAAAATAGATAACTTACGAGAGACAGCCAAGGATAGTGTTCTTACAAACTACATTATTGAAGCTTCTTTATTTGATTCTGGAAGCTGGTACACCTCTGATGGGAATCCTGATCTCCTTTCATCAAATGTAGCTGACATAAAGCTCCAACCATCAAGTGCACCATTAGGGTTTCATGGTTATGTGCTTGTGGGGAAACTGCAATCACCAAAGCTTTGGTCTGCAGAGCAACCATACCTCTATACCCTAGTTGTTGTCCTGAAAGATCAAGCTGGTCGTGTTGTTGAGTGTGAATCATGCCCAGTAGGATTTAGAAAAGTATCTACAGCCCACAAACAGCTGCTTGTTAACGGACATGCAGTTGTAATAAGAGGTGTAAACAGGCATGAACATCATCCACAAGTGGGAAAGGCAAACATAGAATCCTGCATGATCAAGGATTTGGTTTTAATGAAGCAAAACAATATTAATGCTGTGAGGAACAGCCATTATCCCCAACATCCACGTTGGTACGAGCTTTGTGATTTGTTTGGCATGTACATGATAGATGAAGCCAATATTGAGACACATGGTTTTGATTATTCTATGCATCTCAAGCACCCTACTATGGAACCAACTTGGGCAACTGCAATGCTGGACCGTGTGATAGGCATGGTTGAGAGAGATAAAAATCATACATGCATTATTTCCTGGTCTTTAGGGAATGAATCTGGATTTGGATCTAATCATTTTGCTCTAGCTGGTTGGATTCGAGGAAGAGACCCATCGCGAGTGTTACATTATGAAGGAGGTGGATCCAGGACTCCATGCACTGATATTGTGTGCCCCATGTATATGCGTGTTTGGGACATGGTGAAAATTGCCAATGATCCTAATGAAACACGTCCTTTGATTCTTTGCGAGTATTCACATGCAATGGGGAATAGTAATGGGAATCTACATATATATTGGGAAGCAATTGACACGACATTTGGACTCCAAGGAGGCTTTATTTGGGATTGGGTTGATCAGGCCCTGTTGAAAGTTCATGCAGATGGTACAAAGCATTGGGCATATGGAGGTGAATTTGGGGATATTCCCAATGACTTGAATTTCTGTTTGAATGGCCTCATGTTTCCTGATCGAACTCCTCATCCCGTTTTACATGAGGTTAAGTACTTATACCAGCCAATCAAGGTGACTTTAAATGAGGGGAAATTGGAGATAAAAAATACCCATTTTTTCCAAACAACAGAAGGATTAGAGTTCAGCTGGTACATTTCTGCAGATGGATACAACCTTGGATCTGGTATTTTGAGTCTTGCCCCAATAAAGCCCCAGAGCAGTTATGCTGTTGATTGGCAATCAGGTCCATGGTATTCTCTATGGGCTTCATCAGAAGAAGAAGAAATATTCCTGACTATAGCTGTGAAGCTTTTGAATTCCACACGCTGGGTTGAAGCTGGTCATATTGTTTCATCTGCTCAAGTTCAACTGCCTGCCAGGAGAGACATTGTTCCTCATGCTATCAATATTAGTGGTGGCACTCTAGTAGCTGAAACACAAGGCGATACAATCAAAGTCAGCCAGCAAGATATTTGGGACATAACATTTAACACTAAAACGGGTTTAGTTGAAAGCTGGAAGGTTAAAGGAGTCAATGTTATGGAAAAGGGCATACTCCCATGTTTCTGGCGAGCTCCTACTGATAATGACAAAGGAGGAGGAGTGAGCAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATGGACAGCCTCCACTTTATTACTGAGAGCTGTTTGGTGCAAAAAATGACAGAGAACATGGTTAGAATATCGGTTGTTTTTAATGGTGTTACTGAGGGCGGGGAGGGTTCTCTCTCTAACCAAGTCAAGTCAAAGGTTTTATTCACAACTCAAATGACATATACAATTTATGCTTCTGGGGATGTCATTATGGAATGCAATGTGAAACCAAACCCTGATCTTCCTCCTTTGCCACGCATGGGAATTGTGTTAAATGTGGAAAAATCGTTGGATCAAGTAACTTGGTATGGAAGAGGGCAATTTGAGTGTTATCCAGATCGAAAAGCTGCTGCCCAGGTTGCAGTCTATGATCATAATGTTGGAGAGTTGCATGTTCCTTATATTGTTCCTGGGGAAAGTTCAGGTAGGGCAGATGTTAGATGGGCAACATTCAGAAACAAAAATGGTTTTGGAGTATATGCTTCTAAGTATGGTAGCTCTCCACCCATGCAAATGAGTGCAAGCTACTATAGCACTTCTGAACTTGACCGGGCCACACACAATGAAGAACTCGTTGAAGGAGATAGCATTGAGATTCATCTAGATCACAAGCACATGGGATTGGGTGGAGATGATAGTTGGTCCCCATGCGTCCACGACCAATATTTGATTCCTGCTTTGCCGTACTCATTCTCTATTAGGTTGTGTCCAGTAACTCCGGGCACTTCTGGTTATGACATCTACAAATCCCAGCTTCAAAATTCCTGA 3123 0.4188 MMASSSSSSLVVGPHHLTTRNGYRVWEDPSFIKWRKRDPHVTLHSHDSVEVPSNWQLHGFDCPIYTNVQYPFPLDPPFVPVENPTGCYRVYFDIPKEWEGRRILLHFEAVDSAFCAWINGHPIGYSQDSRLPAEFEITDFCHPCGSDCKNVLAVQVFRWSDGSYLEDQDQWRLSGIHRDVLLLAKPEVFVTDYFFKSNLAEDFSYAEILVEVKIDNLRETAKDSVLTNYIIEASLFDSGSWYTSDGNPDLLSSNVADIKLQPSSAPLGFHGYVLVGKLQSPKLWSAEQPYLYTLVVVLKDQAGRVVECESCPVGFRKVSTAHKQLLVNGHAVVIRGVNRHEHHPQVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSMHLKHPTMEPTWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGSNHFALAGWIRGRDPSRVLHYEGGGSRTPCTDIVCPMYMRVWDMVKIANDPNETRPLILCEYSHAMGNSNGNLHIYWEAIDTTFGLQGGFIWDWVDQALLKVHADGTKHWAYGGEFGDIPNDLNFCLNGLMFPDRTPHPVLHEVKYLYQPIKVTLNEGKLEIKNTHFFQTTEGLEFSWYISADGYNLGSGILSLAPIKPQSSYAVDWQSGPWYSLWASSEEEEIFLTIAVKLLNSTRWVEAGHIVSSAQVQLPARRDIVPHAINISGGTLVAETQGDTIKVSQQDIWDITFNTKTGLVESWKVKGVNVMEKGILPCFWRAPTDNDKGGGVSSYLSRWKAAGMDSLHFITESCLVQKMTENMVRISVVFNGVTEGGEGSLSNQVKSKVLFTTQMTYTIYASGDVIMECNVKPNPDLPPLPRMGIVLNVEKSLDQVTWYGRGQFECYPDRKAAAQVAVYDHNVGELHVPYIVPGESSGRADVRWATFRNKNGFGVYASKYGSSPPMQMSASYYSTSELDRATHNEELVEGDSIEIHLDHKHMGLGGDDSWSPCVHDQYLIPALPYSFSIRLCPVTPGTSGYDIYKSQLQNS* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0934 1040 Pfam Glycosyl hydrolases family 2, sugar binding domain 42 186 IPR006104 GO:0004553|GO:0005975
Apr5g0934 1040 Gene3D - 719 1022 IPR014718 GO:0030246
Apr5g0934 1040 Pfam Glycosyl hydrolases family 2 188 316 IPR006102 GO:0004553|GO:0005975
Apr5g0934 1040 Gene3D Immunoglobulins 188 316 IPR013783 -
Apr5g0934 1040 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 433 447 IPR023232 -
Apr5g0934 1040 PANTHER GLYCOSIDE HYDROLASE FAMILY 2 PROTEIN 47 1025 - -
Apr5g0934 1040 Pfam Beta-galactosidase, domain 4 611 704 IPR032312 -
Apr5g0934 1040 PRINTS Glycosyl hydrolase family 2 signature 110 125 IPR006101 GO:0004553|GO:0005975
Apr5g0934 1040 PRINTS Glycosyl hydrolase family 2 signature 327 341 IPR006101 GO:0004553|GO:0005975
Apr5g0934 1040 PRINTS Glycosyl hydrolase family 2 signature 358 376 IPR006101 GO:0004553|GO:0005975
Apr5g0934 1040 PRINTS Glycosyl hydrolase family 2 signature 433 448 IPR006101 GO:0004553|GO:0005975
Apr5g0934 1040 PRINTS Glycosyl hydrolase family 2 signature 506 521 IPR006101 GO:0004553|GO:0005975
Apr5g0934 1040 Pfam Glycosyl hydrolases family 2, TIM barrel domain 321 603 IPR006103 GO:0004553|GO:0005975
Apr5g0934 1040 Gene3D Glycosidases 318 598 - -
Apr5g0934 1040 SUPERFAMILY (Trans)glycosidases 318 600 IPR017853 -
Apr5g0934 1040 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 368 393 IPR023230 -
Apr5g0934 1040 SUPERFAMILY beta-Galactosidase/glucuronidase domain 596 706 IPR036156 -
Apr5g0934 1040 Gene3D Immunoglobulins 600 708 IPR013783 -
Apr5g0934 1040 SUPERFAMILY Galactose-binding domain-like 30 186 IPR008979 -
Apr5g0934 1040 Pfam Beta galactosidase small chain 737 1020 IPR004199 GO:0004565|GO:0005975|GO:0009341
Apr5g0934 1040 PANTHER BETA-GALACTOSIDASE 47 1025 - -
Apr5g0934 1040 SUPERFAMILY Galactose mutarotase-like 718 1023 IPR011013 GO:0003824|GO:0005975|GO:0030246
Apr5g0934 1040 Gene3D - 19 186 - -
Apr5g0934 1040 SMART Bgal_small_N_2 736 1021 IPR004199 GO:0004565|GO:0005975|GO:0009341
Apr5g0934 1040 SUPERFAMILY beta-Galactosidase/glucuronidase domain 188 316 IPR036156 -