Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0931 ATGTTCACCGGCGCGGTGGCTATGGCAGCAGAGTGTGACATGCTAACCATGTTAGGCCTTAGAGACCTAGTTCTCATAGCTCCAACCCCTTCTCAAGTTTCACTTCACCACCATCAACAACAACAACAACAAACCCAACAGCCCATTTCAGCTGAACACCATGCCAACCTCCCTTTACCTTCTTCAGCCTCTCTCAGTGTTGGCCTTGGCTTTTTCCCTCTCTTAACTGCTACACCATGCATGCCACACCCTCATGATCACACCAATGATGTTCAAGTCCATAACAATACCACCAACAACTATTGGAACCTCAACATGTGTGGCTCCGAAGTGAATTCTGCAAGAGAAGGAATGATGGTGGAAGAAGACGATGGTAGAAACAAGCACTTGATGGAGGGCGAAGAGAGTGGTGAGTTCAGGGTGTGTGAAGATTGTGGCAACAGGGCTAAGAGAGATTGTAGCTACAGAAGGTGCAGGACTTGTTGCAAAGGACGTGGCTTTGATTGCAGCACTCACGTGAGGAGCACGTGGGTTCCTGCATCTTTAAGGCGCAGTAGTGGTGGTAGCAGTGATGGTGGCGATGCTAGTGCTTCCAAGAGGCTAAGAGCTTTGGGGTCATCCCAGAATGTTGCTGCTACCTCTCACAGTTCCACTTCCAATGCTACCACAACCAAGAGCTGTAGCTTAGATACTAGCTCTTGTCATCAAGATGCTGGTTTCAAACAGTCTTTGCCACGGCATGTTCATGCACCTGCTGTGTTTAGGTGCCATAGAGTGTCTGCTATTGGCAGTGGTGAAGATGAATTTGCCTATTTGGCCACGGTTCGTATTAGTGGCCATGTGTTCAAGGGGTTTTTGTATGATCATGGTGTTGGTGGGAAGAATGAAGTACCAAATGTTTCAGAACTTCAACTGGGAAATAATGGCAGTGGAAAGAGCAACAGGGAATGTTCTGCAATTGGGGTTCCTAACAGTGCCTTCCCTGCTTCTGCTTGCTGA 999 0.4805 MFTGAVAMAAECDMLTMLGLRDLVLIAPTPSQVSLHHHQQQQQQTQQPISAEHHANLPLPSSASLSVGLGFFPLLTATPCMPHPHDHTNDVQVHNNTTNNYWNLNMCGSEVNSAREGMMVEEDDGRNKHLMEGEESGEFRVCEDCGNRAKRDCSYRRCRTCCKGRGFDCSTHVRSTWVPASLRRSSGGSSDGGDASASKRLRALGSSQNVAATSHSSTSNATTTKSCSLDTSSCHQDAGFKQSLPRHVHAPAVFRCHRVSAIGSGEDEFAYLATVRISGHVFKGFLYDHGVGGKNEVPNVSELQLGNNGSGKSNRECSAIGVPNSAFPASAC* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0931 332 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 141 182 IPR006510 -
Apr5g0931 332 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 16 332 - -
Apr5g0931 332 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 244 291 IPR006511 -
Apr5g0931 332 MobiDBLite consensus disorder prediction 205 225 - -
Apr5g0931 332 Pfam Domain of unknown function (DUF702) 141 291 - -
Apr5g0931 332 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 16 332 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0931 Apr-Chr5 13730060 13735858 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Apr5g0931 DUF702 3e-50 No_clan