Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g0920 | ATGTCTGAATTGGTGGCCCGTACGGGTCGACTTCAACAGCGATACGAGAACGGTTATCGCCTTGTCGCAGGGTGTGTTCCTTTTAGGTATAAAAGTTCTGATGATTGTGGAAACTCTAGATCTGAAAAGATTGTTGAAGTGCTTATGATTAATTCACCTAGTGGACCAGGTCTTTTGTTCCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAAGCAGCTGTAAGAGAAGCTATAGAAGAAGCAGGAGTCCGAGGGGACCTAATGGATTTTCTTGGATACTACGAGTTTAGGAGTAAGACCCACCAAGATGAATTCAGTCCTGAAGGTTTATGTAAAGCAGCAATGTTTGCCTTGTTTGTCAAGGAGGAACTTGAATTATGGCCTGAGCAAAGTACCAGAAACAGGAGTTGGCTAGCTATATCAGAGGCACTTGGAAGCCTCCGGCACGCATGGATGAGGGACGCTCTGGAATGCTTCTGTAAATGGCATGAGGATAAGTTGGTGAGTGGAACGACAAGATTCACCTGA | 534 | 0.4532 | MSELVARTGRLQQRYENGYRLVAGCVPFRYKSSDDCGNSRSEKIVEVLMINSPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCKAAMFALFVKEELELWPEQSTRNRSWLAISEALGSLRHAWMRDALECFCKWHEDKLVSGTTRFT* | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g0920 | 177 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 5 | 163 | - | - | |
| Apr5g0920 | 177 | ProSitePatterns | Nudix box signature. | 63 | 84 | IPR020084 | GO:0016787 | |
| Apr5g0920 | 177 | Pfam | NUDIX domain | 47 | 156 | IPR000086 | - | |
| Apr5g0920 | 177 | SUPERFAMILY | Nudix | 11 | 164 | IPR015797 | - | |
| Apr5g0920 | 177 | PANTHER | DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE | 1 | 172 | - | - | |
| Apr5g0920 | 177 | PANTHER | OS03G0810300 PROTEIN | 1 | 172 | - | - | |
| Apr5g0920 | 177 | ProSiteProfiles | Nudix hydrolase domain profile. | 18 | 162 | IPR000086 | - | |
| Apr5g0920 | 177 | CDD | Nudix_Hydrolase_9 | 21 | 155 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr5g0920 | Apr-Chr5 | 13565140 | 13568802 | Wgd |