Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0912 ATGGGGAGTAGACCCAGGGTTGTTGGTGTTGAAGATGACAAGGGAGCAGAAAGAGGAATGCCGAGCTTCAATTCTGAGTTACCCATTTCCAATTCATGCTATACAGAGGGGAGCACAATTGATTCATTTCATGTTTCTGACTTTGGAGCATTTGATCAGTCATATCGTGTAGAGGATGCTGTTGACCTGAGTGGAAACTCAGTTTATAACTCACTAAAAGTAAGTAGCCAAACAATTTCTCCAGGCTCTGCTCACATAAGTAGCCTTGGTAAGTTGCCAACTTCACTTGATAAAAGCCCATTGACAAACCAAACGGAGCCGCATAGGCTGCAATTACAAAGGATTCAACCATCAAATTCTGGCACCACATTAGATTGTAATACAGATAACAGGGAGGACTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGTTGACACTGATGACAAGAATCAGCGGTTTGAGAGAAGTCAAGCCCTTGTTGTTGTGGCTTCTGACTCCAGTGACAGATCAAAAGATAAAACAGACCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGGAAAAGCCGTTTGAGAAAGAAAGCCTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGACAGCAGGGAATCTTCATATCAAGCTCGGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCTAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACTGAACTTCGCATGATTGTTGATGGTATATTGGCACATTATGACGAGATTTTTAAGCTGAAAAGTGTAGCTGCTAAGGCTGACGTTTTCCATTTGTTGTCTGGAATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTAGGTCATCTGAACTCCTCAAGCTTCTGGTAAATCAATTAGAGCCTCTTACAGAGCAGCAGCTGATGGGTATTACCAACTTGCAGCAATCCTCCCAACAAGCAGAAGATGCATTATCTCAGGGTATGGAAGCATTGCAACAGTCCCTTGCAGAGACGTTGTCCACTGGAGCACCTGCCTCGTCTGGTTCATCTGGGAATGTGGCAAATTACATGGGTCAAATGGCTATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCGACAGGCTGACAATCTGCGCCAGCAAACTCTACAACAAATGCACCGTATATTGACAACACGCCAATCAGCTCGTGCACTCCTTGCTATACATGACTATTTTACGCGTCTGCGTGCTCTTAGTTCACTCTGGCTGGCCCGCCCAAGAGATTGA 1404 0.4516 MGSRPRVVGVEDDKGAERGMPSFNSELPISNSCYTEGSTIDSFHVSDFGAFDQSYRVEDAVDLSGNSVYNSLKVSSQTISPGSAHISSLGKLPTSLDKSPLTNQTEPHRLQLQRIQPSNSGTTLDCNTDNREDSAMADASPRTDISTDVDTDDKNQRFERSQALVVVASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFKLKSVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLMGITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFTRLRALSSLWLARPRD* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0912 467 Pfam bZIP transcription factor 182 222 IPR004827 GO:0003700|GO:0006355
Apr5g0912 467 Coils Coil 258 278 - -
Apr5g0912 467 MobiDBLite consensus disorder prediction 79 161 - -
Apr5g0912 467 MobiDBLite consensus disorder prediction 145 159 - -
Apr5g0912 467 Coils Coil 201 228 - -
Apr5g0912 467 CDD bZIP_HBP1b-like 182 234 - -
Apr5g0912 467 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 58 467 - -
Apr5g0912 467 ProSiteProfiles DOG1 domain profile. 247 464 IPR025422 GO:0006351|GO:0043565
Apr5g0912 467 MobiDBLite consensus disorder prediction 1 23 - -
Apr5g0912 467 Pfam Seed dormancy control 264 339 IPR025422 GO:0006351|GO:0043565
Apr5g0912 467 PANTHER TRANSCRIPTION FACTOR TGA9 58 467 - -
Apr5g0912 467 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 185 200 IPR004827 GO:0003700|GO:0006355
Apr5g0912 467 MobiDBLite consensus disorder prediction 79 130 - -
Apr5g0912 467 Gene3D - 181 232 - -
Apr5g0912 467 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 180 224 IPR004827 GO:0003700|GO:0006355
Apr5g0912 467 SUPERFAMILY Leucine zipper domain 182 225 IPR046347 GO:0003700|GO:0006355
Apr5g0912 467 SMART brlzneu 178 241 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0912 Apr-Chr5 13439008 13449067 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g0912 DOG1 3.9e-33 No_clan