Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0909 ATGGCTTTCAATGTTCATCTTCTCACTGGGATTATACTCATTCTTATCTCAGCCACAATCATTGTCGAAGCTGCAACGATGTTCATTAACGATGCATCTCTCAATCGAAGTAGTTTCCCAGAGGGTTTTATTTTTGGAACAGGATCGTCTGCTTACCAGTTCGAAGGTGCAGCTAATGTTGGTGGCAGAGGCCCCAGTATATGGGATACGTACTCTCATATGTATCCAGATAAGATAGTGGACAGAAGTAACGGAGACGTTACCATCGATCAATACCATCGTTATAAGGAAGATGTTGAAATCATGAAGGAACTAAACATGGATGCTTATAGATTCTCAATCTCTTGGTCCAGAATACTGCCAAAGGGAAAGGTTAGTGGAGGAGTGAACAAAGAAGGAATCAACTATTACAACAACCTCATCAATGAGTTGCTAGCCAAAGGTCTGAAACCCTTTGTGACTATTTTTCATTGGGACCTTCCTCAAACCTTAGAAGACGAATATGGTGGCTTTTTAAGTCCAAATATAGTGAATGATTTTCAAGACTATGCAGAGCTTTGTTTTAAAGAATTTGGAGACAGGGTGAAGCATTGGATTACATTAAATGAACCATGGACCTTCAGCAAATATGGCTATGCTGATGGCATTTCAGCACCAGGACGATGTTCACCTTGGCAAAACTTGAATTGCCCTGCTGGTGATTCAGCCACTGAACCTTATATAGTGGCTCACAATCAGTTACTTGCTCATGCAGCTGCTGTCAACATTTATAAGACTAAATATCAGGCATCTCAAAAGGGTATTATAGGAATATCACTACCATGTCACTGGATGGTGCCACTCTATGATACAGAGTTGGATCGTGGTGCTGCACAAAGAGCCCTTGATTTCATGTTTGGATGGTTTATGGAGCCATTGACAAAAGGAGATTACCCCAATTCTATGCGGTCGTTGGTAGGGAACCGATTACCAAAGTTCTCTGCATATGAAGTGAGGCTTGTAAAAGGGTCCTTTGATTTTATTGGATTAAACTATTATACTTGCTACTATGCCACTGATGCACCTGAATTAAGTGAAGCCAGGCCTAGCTACCTCACAGATTCTCTTGTTAGTCTTACAAGTGAGAGTAATGGAATACCTATTGGTGAAAAGACTACTTCAAAATGGTTGTTAGTTTGTCCAAAAGGGATTCAAGAACTGTTGCTCTATATTAAAACAAAGTATAACAACCCTTTGATCTACATCACTGAAAATGGTATTGATGAATTCAATGATTCAACACTCTCCCTTGAGGAAGCCCTTGCTGATGCATCCAGGATTGATTACTATTATGATCATCTCAATTATCTTCAAATTGCAATCAAGAATGGCGTGAACCTAAGAGGATATTTTGCATGGTCATTACTTGACAGCTTCGAATGGACTTTAGGTTACATTTCAAGGTTTGGATTAATCTTTGTAGATTACAGCAACAACCTCAAAAGACATCCAAAGCTGTCAGCCATTTGGTTCAGAAATTTCCTACAACGCAAAGTAGTAACACATGATGATTTACGCTAA 1560 0.3955 MAFNVHLLTGIILILISATIIVEAATMFINDASLNRSSFPEGFIFGTGSSAYQFEGAANVGGRGPSIWDTYSHMYPDKIVDRSNGDVTIDQYHRYKEDVEIMKELNMDAYRFSISWSRILPKGKVSGGVNKEGINYYNNLINELLAKGLKPFVTIFHWDLPQTLEDEYGGFLSPNIVNDFQDYAELCFKEFGDRVKHWITLNEPWTFSKYGYADGISAPGRCSPWQNLNCPAGDSATEPYIVAHNQLLAHAAAVNIYKTKYQASQKGIIGISLPCHWMVPLYDTELDRGAAQRALDFMFGWFMEPLTKGDYPNSMRSLVGNRLPKFSAYEVRLVKGSFDFIGLNYYTCYYATDAPELSEARPSYLTDSLVSLTSESNGIPIGEKTTSKWLLVCPKGIQELLLYIKTKYNNPLIYITENGIDEFNDSTLSLEEALADASRIDYYYDHLNYLQIAIKNGVNLRGYFAWSLLDSFEWTLGYISRFGLIFVDYSNNLKRHPKLSAIWFRNFLQRKVVTHDDLR* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0909 519 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Apr5g0909 519 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 5 514 - -
Apr5g0909 519 Pfam Glycosyl hydrolase family 1 37 511 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 Gene3D Glycosidases 20 510 - -
Apr5g0909 519 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 PRINTS Glycosyl hydrolase family 1 signature 413 421 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 PANTHER GLYCOSYL HYDROLASE 5 514 IPR001360 GO:0004553|GO:0005975
Apr5g0909 519 SUPERFAMILY (Trans)glycosidases 28 509 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0909 Apr-Chr5 13406523 13411470 Dispersed/Wgd