Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0890 ATGGGTGCAGTTGAAGAGACCACACAGAAATATATAAATGACAAAGTTGGTGAAGAGAAAAATTCAGTTAATATTAATGCTAGTGATGCAGAAAATCCTGAGGCAAATGACAAAGGAGGTCCTAAAGAAACCTGGGTAAGAGACAATCAAGTGTTGGAGACTCCTCTACCTGAAGTATTAGAGAGTTCTCCAAAAGATGAAGCTAAAGAGACCACACAAAACCCTGTAAATGGCAAAGTTGGTGATGCAGAAAATCTATTTAACATTAAAAGTGGTGAAATGGAAAATGTTGCAGTAAGTGACAAAGAAGGTCCTGAAAAAGCCTCAGTAAAAGACAGTGCAGATTGTCTTCCAAGGGAAGCAAAGGAAATGTTGATATCTTTGGCAAATAAATGGGAGAATGTAATTGATGCTACTGCATTGCAGGTGTTTCCTCTTAAAGGGGCAATGACAAATGAAGTATTTCAGATAAAATGGGAAACAACAACAGATGAAAGCTCACGAAAGGTTGTAGCAAGGATATTTGGTGAGGGCACTCACATTTTCTTTGATAGGGATGTTGAGGTCAGAACATTTGAATGCATCTCAAAGAATGGAAAGGGACCTCTTTTGCTAGGAAGGATTGCAAATGGCCGCATTGAGGAATTCATTAATGCACGGACATTAACAGCACCTGATCTGCGAGATCCATCCATTTCTGCTCTTATAGCAGCAAAAATGAAGGAATTTCATGATCTTGACATGCCTGGTCCAAAGAAAGTGAACCTTTGGGATAGATTAAGAAATTGGCTTAGCGAGGCCAAGCGCTTGTCTCCTCCTGAAGAAAATGAAGAATTTCATTTGGACACAATGGACAAGGAAATCTCTATCCTCGAGAAAGAACTATCAGGCATTCACCAAGTTATAGGGTTTTGCCACAATGATTTACAGTATGGTAACATAATGCTTGAGGAAGAGTCCAATTCTGTGACCATAATTGATTATGAATATGCAAGTTATAATCCTGTGGCATATGACATAGCAAATCATTTCAATGAGATGGCATCAAACTATCATTCAGACACCCCACATATTCTTGACTTCAGTAAATATCCCGATTTGGAGGAGCGTCAAAGATTTGTGCATGCATATTTGAGTTCTGCAGGTGAAAAACCCAGTGACAGTGAAGTGGAGCAGCTACTCGATGAAATTGAGAAGTATACACTTGCAAATCATTTATTATGGGGCTTGTGGGGATTAATCTCGGAGCATGTAAATAAAATTGACTTTGACTATAAGGGATATGCGAAACAGAGGTTTCAAGAGTACTGGTCAAGGAAAACTAGTCTTTTGAGCTCAGATGGGTCCTCCAATGACAATGTGACTAACGGAGAGAAAGCACTAACATCGACAACCAGCGGAAAACCAACTAAGAACTCTAGTGTGTTCAAGAAGTGGAAGAAATTTATTGGTCTCGGCTTTTTCAGATCGAAACACTAG 1479 0.3928 MGAVEETTQKYINDKVGEEKNSVNINASDAENPEANDKGGPKETWVRDNQVLETPLPEVLESSPKDEAKETTQNPVNGKVGDAENLFNIKSGEMENVAVSDKEGPEKASVKDSADCLPREAKEMLISLANKWENVIDATALQVFPLKGAMTNEVFQIKWETTTDESSRKVVARIFGEGTHIFFDRDVEVRTFECISKNGKGPLLLGRIANGRIEEFINARTLTAPDLRDPSISALIAAKMKEFHDLDMPGPKKVNLWDRLRNWLSEAKRLSPPEENEEFHLDTMDKEISILEKELSGIHQVIGFCHNDLQYGNIMLEEESNSVTIIDYEYASYNPVAYDIANHFNEMASNYHSDTPHILDFSKYPDLEERQRFVHAYLSSAGEKPSDSEVEQLLDEIEKYTLANHLLWGLWGLISEHVNKIDFDYKGYAKQRFQEYWSRKTSLLSSDGSSNDNVTNGEKALTSTTSGKPTKNSSVFKKWKKFIGLGFFRSKH* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0890 492 MobiDBLite consensus disorder prediction 443 472 - -
Apr5g0890 492 PANTHER CHOLINE/ETHANOALAMINE KINASE 92 474 - -
Apr5g0890 492 PANTHER CHOLINE/ETHANOLAMINE KINASE 92 474 - -
Apr5g0890 492 Gene3D - 176 437 - -
Apr5g0890 492 Pfam Choline/ethanolamine kinase 167 368 - -
Apr5g0890 492 CDD ETNK_euk 141 439 - -
Apr5g0890 492 Gene3D Phosphorylase Kinase; domain 1 130 216 - -
Apr5g0890 492 SUPERFAMILY Protein kinase-like (PK-like) 115 441 IPR011009 -
Apr5g0890 492 MobiDBLite consensus disorder prediction 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0890 Apr-Chr5 13061511 13070237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0890 104 446 Acyl Lipid Metabolism Gene Families AT1G74320 64.140 1.11e-169 480
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0914 2 14650985 14662784 Apr5g0890 5 13061511 13070237 PCT