Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0889 ATGGCCACTGAAAAGCTTAGATATAGTTCCAAATTCCTTGAGAGTTCTAAACCCTACTTTGCCATGATCTCTTTACAGTTTGGCTATGCTGGCATGAACATTATCACTAAGGTCTCTCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTTTATCGCCATGCTGTTGCCACCGCGGTCATTGCTCCATTTGCCTTTATTTTTGAAAGGAAAGGTCAACCCAAGATAACATTTCCAGTTTTCATGCAAATTTTCGTCCTAGCTCTCCTTGGGCCTGTGGTTGATCAAAACTTCTACTATGCTGGGTTGAAGCTCACATCGCCAACCTTCTCATGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCAGTTCTATGCCGAATGGAGAAAATTAACATAAAGCAGGTGAGATGCATAGCAAAGATAGGGGGAACGTTAGTAACAGTGGCAGGGGCTATGCTGATGACCCTGTACAAAGGTCCTATAGTGGAGCTGATATGGGCCAAACATGCTGATCTTCACAATAAAACCAATGCAACAAGCACCACAGGATCCCCAGACAAAGATTGGTTCTTAGGCTGCATATTCCTTATCATTGCCACCCTTGCCTGGGCTTCCCTCTTTGTTTTACAAGCCAAAGCTATAAAGACGTACAAGAATCATCAGCTGAGCCTCACTTCCCTTGTGTGCTTTATAGGCACTCTTCAAGCTATTGCCGTTACTTTTGTTGTTGAACACAATCCTTCTGTATGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCCTATGCCGGGATTGTGACCTCAAGCATATCATACTATGTACAAGGACTGGTAATTAAGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTAGCAGAACAAATTTATCTTGGGGGTGTGATTGGGGCCATCTTGATTGTTATAGGGTTATACTCTGTTCTGTGGGGAAAGCACAAAGAGCAAAAAGAAAGCAAAGTGGCTGATGAAATTCCCTTGCCTGTAAAGGATGCTCAAATTGGAGTAATTGCAGGGGCAGTGATTGATGCCCCAAATAATGTTACCGAAGTCAAATATGGTCAGAAAGGAGAAGCCAACAAGCCCTCTTCCATCGTATTAAATATGCCTATTCGTGAGCCTCCCGTGAAAGCTAACCAAGAGGCAAAGGCTTAA 1230 0.4366 MATEKLRYSSKFLESSKPYFAMISLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAVATAVIAPFAFIFERKGQPKITFPVFMQIFVLALLGPVVDQNFYYAGLKLTSPTFSCAMSNMLPAMTFVMAVLCRMEKINIKQVRCIAKIGGTLVTVAGAMLMTLYKGPIVELIWAKHADLHNKTNATSTTGSPDKDWFLGCIFLIIATLAWASLFVLQAKAIKTYKNHQLSLTSLVCFIGTLQAIAVTFVVEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVIGLYSVLWGKHKEQKESKVADEIPLPVKDAQIGVIAGAVIDAPNNVTEVKYGQKGEANKPSSIVLNMPIREPPVKANQEAKA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0889 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Apr5g0889 409 Pfam EamA-like transporter family 18 143 IPR000620 GO:0016020|GO:0016021
Apr5g0889 409 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020|GO:0016021
Apr5g0889 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 340 - -
Apr5g0889 409 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Apr5g0889 409 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0889 Apr-Chr5 13032504 13035199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0889 1 402 Nodulin-like Gene Family AT5G07050 66.505 0.0 542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0920 2 14929791 14932716 Apr5g0889 5 13032504 13035199 PCT