Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0888 ATGGCGGCAATGTCTCCTTCCTTCTCTCCCTCTCGTACCACCTGCGCTTCTCTCCTCCGCCAATTGCAGATGATATGGGATGAGATTGGAGAGAGTGACAGTGATAGAGATAATATGCTTCTTCAACTGGAGCAAGAGTGCCTTGACATTTATCAAAGGAAAGTTGAGGAGACGAGGAAGCACAAGGCTGACTTGTATCAGTCGTTGGCTGAAGCTGAAGCCGAAGTGGCCAATATCATTTCTTCCCTTGGAGAATCTACTTCCTTCTCACGGGGGAAGGGAACTCTTAAGCAGCAAATAGCTACCATTAGACCTGTCTTAGAAGACTTGAGGTCAAAGAAGGATGATAGAATCAAAGAATTTTCAAAGATAAAGTCCCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTGTGGGCAGTCCAAAAATGTCACAGATCCAAATCAAGGTGACCTGACAGTGAAGAAATTAGGGGAACTCAAGTCACATCTCCAGGAGCTTCAGAATGAAAAGATCTTACGCCAGCAGAAAGTGAAGAGTCATATCAGCACTATTAGCGAGCTTTCGATAGTAATGTCAATTGATTTTTTGAAGACGTTAAATGAAGTTCACCCAACTTTGGGCGATTCATCAAAAGGTACACCACAGAGCATTAGCAATGACACGCTTGCCAGATTAACTGGGGTTATTCACTCATTAAAGCGAGAGAAGCAACAAAGGATACAAAAGTTACAAGAGCTTACTAAATTGCTGGTAGGGCTGTGGGATCTTATGGAGACACCAATGGAAGAACAAAAGGCCTTTAGCCATCTTACTAGATTAATTTCAGCATCAGTTGATGAAGTGTCAATACAAGGGTGCCTTTCTGTTAATGTCATTGAGCAGGCTGAGGTTGAAGTTCAGCGCTTAAATGTTTTGAAAGGCAGTAAGATGAAGGATTTAGTGTTTAAGAGGCAGCATGAGCTTGAAGAAATTTACAGAAGTGTTCACATGGATGTGGATAGTGAAGCTGCCAAACAGGTTTTGACTAGCCTCATTGAATCTGGTAACATTGATCTTTCTGATTTGCTTCAAAGCATGGATGATCAAATTATAAAAGCCAAAGAGCAAGCTCTCAGCAGAAGAGATATCTTAGATAGGGTAGGGAAATGGAAATTTGCAGCCGAGGAGGAAAAGTGGCTAGATGAATATGAAAAGGATGAAAATCGATATAGTGCAGTAAGAGGAGCACACAAAAATTTGAAGCGAGCAGAGAAAGCACGGATTCTTGTCAGCAAGATAGCATCTATTGTTGAGAACTTGACTGCAAAAGTAAAAGCCTGGGAAATGGAAAAAGGAATACCTTTCTTATATGAAAAGGTTCCATTGTTACATATCTTGGATGAATATATCGTACAACGGCAACTGCGAGAAGAAGAAAAGCGCAAATCTCGGGAGCAAAAGCGGCAACAGGAACAACAAGTTGTAGAGCAAGAGACACTTTTTGGTTCAAGATCTGCAACGAAAAAGCCTCTGGGGCATAGCACTACTGCTAACACCATAGTTGGGACACCAAATGGGCGCCGCATGCTTGCTTCTTCAAGCCGTTATGGAACCTCAGGAGGAAAGGAACGGAGAGAGAGTGGCAGACTAAATAACATAATTCCAGTAAACTATGTTGCTCTTCCCAAAGATGATTCTGTTTCTAGGGGAAGTTAA 1698 0.4199 MAAMSPSFSPSRTTCASLLRQLQMIWDEIGESDSDRDNMLLQLEQECLDIYQRKVEETRKHKADLYQSLAEAEAEVANIISSLGESTSFSRGKGTLKQQIATIRPVLEDLRSKKDDRIKEFSKIKSQISQICAEIAGCGQSKNVTDPNQGDLTVKKLGELKSHLQELQNEKILRQQKVKSHISTISELSIVMSIDFLKTLNEVHPTLGDSSKGTPQSISNDTLARLTGVIHSLKREKQQRIQKLQELTKLLVGLWDLMETPMEEQKAFSHLTRLISASVDEVSIQGCLSVNVIEQAEVEVQRLNVLKGSKMKDLVFKRQHELEEIYRSVHMDVDSEAAKQVLTSLIESGNIDLSDLLQSMDDQIIKAKEQALSRRDILDRVGKWKFAAEEEKWLDEYEKDENRYSAVRGAHKNLKRAEKARILVSKIASIVENLTAKVKAWEMEKGIPFLYEKVPLLHILDEYIVQRQLREEEKRKSREQKRQQEQQVVEQETLFGSRSATKKPLGHSTTANTIVGTPNGRRMLASSSRYGTSGGKERRESGRLNNIIPVNYVALPKDDSVSRGS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0888 565 Coils Coil 55 75 - -
Apr5g0888 565 MobiDBLite consensus disorder prediction 497 543 - -
Apr5g0888 565 MobiDBLite consensus disorder prediction 497 532 - -
Apr5g0888 565 Coils Coil 230 250 - -
Apr5g0888 565 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 503 - -
Apr5g0888 565 Gene3D - 364 497 - -
Apr5g0888 565 Coils Coil 466 494 - -
Apr5g0888 565 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 5 12 560 - -
Apr5g0888 565 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 12 560 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0888 Apr-Chr5 13024392 13031827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0888 13 519 EF-hand Containing Proteins AT5G62250 36.276 1.30e-91 290