Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0885 ATGGAATCAACAACACAACTCAATGTTAGATCACATTTCTTTTCTTTCCTACTATTGCTAAGCATCAAATCACTTGTTACAAAGGCACAATCACCCAATTACATGGGAGACGATTGCCATTACACCACCCAAAAGCCCCTCAGCCATGCATACAAAACCAACCTAAATAACATCCTCACATGGCTATCCTCTGATGCAGCCACAAGCAAAGGATATAATCACCACAGCATAGGAAGCAACAGCAATGGTGATGATGCCGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTTTGTGTCTCTACTGCTACTAGAGATGTTCTTCAGCGCTGCCCCAATAGAGTATCTGCTATTATATGGTATGATTTTTGCATTCTAAGGTACTCTAATGAGAGCTTCTTTGGGAATGTTACAACATATCCAACATGGCATGATGTTGGAACAAAAAAAATATCCAATTTAGAAGAGATTCAGAAAGGTGAGGATTTTATGAGAAGTTTGATTATAAAAGCTACCAAGGAGACCAACAAGTTGTTCTATATGGATGCTTTCAATTTGAGTTCAACTGAGAGAAGGTATGGTTTGGTGCAGTGCTCCAGAGATCTTACAAATGAAGAGTGCAGAGAGTGTTTAGAGGCCATGTTAGCACACGTTCCTAAATGTTGTGAACAAAAGATAGGGTGGTTTGTTGCGGCTGCAAGTTGTCTCATAAAGTATGATGATTATATGTTCTACCTTCTTCACAATCAAACATCTCCAATTATTGTGCCTAATCAGCAAACAGCCAAACAAGGGGGTAATAATGGGACAATACCCAATATCGTTTCTCTATCTTCAAACCATAATGTTCAAACTGAGGAAACACTGAATCCAGAGCTGCCAACAATCCCATTAATCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCAAAGTTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCTGTCAAAAGGCTCTCAAAGGCTTCTTGTCAAGGCTCGGAGGAGTTAAAAAATGAAGTGATGTTCATAGCTAAATTGCAACATCGAAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATTCTTGTATATGAGTATATGCCGAATGCAAGTCTCAACTTTCACCTGTTTGACAATGAAAAGAAAAAGCAGCTAGATTGGAATCTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATACCTTCATGAGGACTCTCGACTCAGAGTTATCCATAGAGATCTCAAAGCTGGTAACATTCTATTAGATGATGAGATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAAAGGGACAGAACCAGGCAAATACAAATCGAGTAATGGGCACTTTTGGATACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGTAAAAAGAACAGTGGATTCTATCTGTCAGAATGCGGTCAAAGTCTTCTTTTATATGCTTGGAGAATATGGTGTGAAGGACATTGTTTGGAATTGATAGATCCAGTTCTGGAAAACTCTTGCATAGCCAGTGAAGTTAGAAAATGCATACACATAGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACAATGTCCACTGTTGTTGTAATGCTTGCAAGTGACACAATGGCACTTCCAAGACCCAACCAGCCAGCATTTTCTGTTGGAAGAATGACCTTAGAGGAAGCATCTACTTCAAAAAGTTCTAAGAATCACTCCATCAATGAAGTAACAATCTCAAACATTATACCAAGGTGA 1899 0.3897 MESTTQLNVRSHFFSFLLLLSIKSLVTKAQSPNYMGDDCHYTTQKPLSHAYKTNLNNILTWLSSDAATSKGYNHHSIGSNSNGDDAVYGLYDCRGDVVGYFCQFCVSTATRDVLQRCPNRVSAIIWYDFCILRYSNESFFGNVTTYPTWHDVGTKKISNLEEIQKGEDFMRSLIIKATKETNKLFYMDAFNLSSTERRYGLVQCSRDLTNEECRECLEAMLAHVPKCCEQKIGWFVAAASCLIKYDDYMFYLLHNQTSPIIVPNQQTAKQGGNNGTIPNIVSLSSNHNVQTEETLNPELPTIPLITILQSTDNFSEASKLGEGGFGPVYKGILPDGRQIAVKRLSKASCQGSEELKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYMPNASLNFHLFDNEKKKQLDWNLRLSIINGIARGLLYLHEDSRLRVIHRDLKAGNILLDDEMNPKISDFGLARAFEKGQNQANTNRVMGTFGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSECGQSLLLYAWRIWCEGHCLELIDPVLENSCIASEVRKCIHIGLLCVQEDAADRPTMSTVVVMLASDTMALPRPNQPAFSVGRMTLEEASTSKSSKNHSINEVTISNIIPR* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0885 632 ProSiteProfiles Protein kinase domain profile. 314 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0885 632 Pfam Salt stress response/antifungal 44 136 IPR002902 -
Apr5g0885 632 Pfam Salt stress response/antifungal 168 248 IPR002902 -
Apr5g0885 632 Gene3D Phosphorylase Kinase; domain 1 277 389 - -
Apr5g0885 632 Pfam Protein tyrosine and serine/threonine kinase 318 584 IPR001245 GO:0004672|GO:0006468
Apr5g0885 632 ProSiteProfiles Gnk2-homologous domain profile. 32 139 IPR002902 -
Apr5g0885 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 273 630 - -
Apr5g0885 632 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 20 269 - -
Apr5g0885 632 Pfam Domain of unknown function (DUF3403) 587 632 IPR021820 GO:0004674
Apr5g0885 632 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Apr5g0885 632 CDD STKc_IRAK 320 585 - -
Apr5g0885 632 SUPERFAMILY Protein kinase-like (PK-like) 298 612 IPR011009 -
Apr5g0885 632 SMART serkin_6 314 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0885 632 Gene3D - 33 139 IPR038408 -
Apr5g0885 632 Gene3D - 150 250 IPR038408 -
Apr5g0885 632 Gene3D Transferase(Phosphotransferase) domain 1 390 593 - -
Apr5g0885 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Apr5g0885 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 269 - -
Apr5g0885 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 273 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0885 Apr-Chr5 12995781 12999962 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0885 13 632 Receptor kinase-like Gene Family AT4G05200 40.719 5.68e-172 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0885 PK_Tyr_Ser-Thr 9.6e-48 CL0016