Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0883 ATGGAGGGAACAACACAACTGAAAGTTAGATCTATATATTCCTTTGCTTTGTTACTATTATTGAGTTTGAAACTACTTGTTACAAAGGCACAATCACTAAACTACGTGGGAGATGATTGCCACAACACCACCGAAGAAGCTCTCAGCAGTGCATACCAAAGCAACCTTAACAACATTCTCGTATGGCTATCCTCTGATGCAGCCACAAGCAAAGGTTATAACCACAACAGCATAGGGAACAACACCAGTGGTGGTGATGATGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCCAGAAGAGAAGTTCTTCAGCGCTGCCCCAATAGAGTATCTGCTATCATATGGTATGATTTCTGCATTCTAAGGTATTCTAATGAAAACTTTTTTGGGAATGTTACAACATACCCATCATGGCATGAAGTTGGATCAAGAAACACTTCTAGTGCAGTAGAGATTCAGAAAGGTGAGGATTTTATGAGAAGTTTGATAAGAAAAGCTACTAAGGAGACCAACCAATTGTTCTATATGGATGGCTTCAATTTGAGTTCCACTGAGCGAAGGTATGGCTTGGTGCAATGTAGTAGAGATCTCACAAATGAGGGGTGCAGGCAGTGTTTAGAGGCCATGTTAGCACAAGTTCCCAAATGTTGTGAACAAAAGGTGGGGTGGCAGGTTTTGGCTGCAAGTTGTCTCATAAAGTATGATGATTATATTTTTTACCTTTTTCACAATCAATCTTCACTTCCTGTGCCTAATAAGCAAACAGCCAAACAAGGGCGTATCAATAAGTCAAGAATCTTAATCATTTGCTTAAGTGTGCTGGGGTCAGTAGCTCTACTTTGTTTCAGTGTATTCTGCTTCTGGTGCAGGAATAGAGCTAGAAAAGATGTGCAGATCCCTCTTCCCATTCCTCTGTCTTCATATCACAATGTTCAAACTGAGGAAACACTGAATCCAGAGCTGCCAACAATCCCATTAATCACAATTCTACAAAGTACTGATAACTTTTCAGAAGCATCAAAGTTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCTGTCAAAAGGCTCTCAAAAGCTTCTGGTCAAGGCTCGGAGGAGTTCAAAAATGAAGTAATGTTTATAGCTAAATTGCAACATCGAAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATTCTTGTATATGAGTATATGCCGAATGCAAGTCTCAATTTTCACCTGTTTGATGATGAAAAGAAAAAGCAACTAGATTGGAATCTAAGGTTAAGCATTATCAATGGAATAGCAAGAGGTATTTTATACCTTCATGAGGACTCCCGACTCAAAGTTATCCATAGAGATCTCAAAGCTAGCAACATTCTACTAGATGATGAGATGAATCCGAAAATATCAGATTTTGGATTGGCAAGGGCATTCGAAAAAGGCCAGAACCAAGCAAATACAAAACGAATAATGGGCACTTATGGGTACATGGCTCCAGAGTATGCTATGGAAGGATTATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGTAAAAAGAATAGTGGATTTTATCTGTCAGAATGCGGTCAAAGTCTTCTTTTATATGCTTGGAGAACATGGTGTGAAGGAAATTGTTTGGAATTGTTGGATCCAGTTCTGAAAAACTCTGGCATAGACAGTGAAGTTGTGAAGTGCATACACATTGGTCTGTTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTGTTATTGTAATGCTTGCAAGTGAGACAATGTCCCTTCCAAAACCCAACCGGCCAGCATTTTCTGTTGGAAGAATGACCTTCGAGGAAGCATCTACTTCAAAAAGTTCCAAGAATCTTTCCATTAATGATGTAACAGTCTCTAACATTTTACCAAGGTAG 2004 0.3972 MEGTTQLKVRSIYSFALLLLLSLKLLVTKAQSLNYVGDDCHNTTEEALSSAYQSNLNNILVWLSSDAATSKGYNHNSIGNNTSGGDDAVYGLYDCRGDVVGYFCQFCVSTARREVLQRCPNRVSAIIWYDFCILRYSNENFFGNVTTYPSWHEVGSRNTSSAVEIQKGEDFMRSLIRKATKETNQLFYMDGFNLSSTERRYGLVQCSRDLTNEGCRQCLEAMLAQVPKCCEQKVGWQVLAASCLIKYDDYIFYLFHNQSSLPVPNKQTAKQGRINKSRILIICLSVLGSVALLCFSVFCFWCRNRARKDVQIPLPIPLSSYHNVQTEETLNPELPTIPLITILQSTDNFSEASKLGEGGFGPVYKGILPDGRQIAVKRLSKASGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYMPNASLNFHLFDDEKKKQLDWNLRLSIINGIARGILYLHEDSRLKVIHRDLKASNILLDDEMNPKISDFGLARAFEKGQNQANTKRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSECGQSLLLYAWRTWCEGNCLELLDPVLKNSGIDSEVVKCIHIGLLCVQEDAADRPTMSTVIVMLASETMSLPKPNRPAFSVGRMTFEEASTSKSSKNLSINDVTVSNILPR* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0883 667 Gene3D Phosphorylase Kinase; domain 1 318 424 - -
Apr5g0883 667 Pfam Protein tyrosine and serine/threonine kinase 353 618 IPR001245 GO:0004672|GO:0006468
Apr5g0883 667 Gene3D - 154 252 IPR038408 -
Apr5g0883 667 Gene3D - 34 141 IPR038408 -
Apr5g0883 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Apr5g0883 667 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 665 - -
Apr5g0883 667 ProSiteProfiles Gnk2-homologous domain profile. 147 252 IPR002902 -
Apr5g0883 667 Pfam Salt stress response/antifungal 40 138 IPR002902 -
Apr5g0883 667 Pfam Salt stress response/antifungal 169 250 IPR002902 -
Apr5g0883 667 ProSiteProfiles Gnk2-homologous domain profile. 34 141 IPR002902 -
Apr5g0883 667 Gene3D Transferase(Phosphotransferase) domain 1 425 630 - -
Apr5g0883 667 CDD STKc_IRAK 355 620 - -
Apr5g0883 667 SUPERFAMILY Protein kinase-like (PK-like) 322 620 IPR011009 -
Apr5g0883 667 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 21 665 - -
Apr5g0883 667 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0883 667 Pfam Domain of unknown function (DUF3403) 622 667 IPR021820 GO:0004674
Apr5g0883 667 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0883 Apr-Chr5 12981166 12984375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0883 11 667 Receptor kinase-like Gene Family AT4G05200 41.874 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr5g0883 PK_Tyr_Ser-Thr 5.5e-48 CL0016