Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0879 ATGGAGTGGCTTCTGCAATTCCTTCATCTCCTCTTTATAGCTTCTCTTCTTATCTGCAGTACAGCAATTTCAGATCAAATTCCCAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAACAACATTGGGGTAGAAGGCCAAATACCAGAATCAACTCATCTGCAGCTATTGTCATCAATTATTCCAAGAAAAGAAAGTGAGAGGATTGCTCTAATCCACCATTTCAATCATGCCTTTAGTGGGTTCTCTGCCATGCTTACAGAGAGTGAAGCTTCTGCACTGTCTGGGCACCCTGGTGTGGTGTCAGTGTTCCCAGATCCAGTTCTTGAAATGCATACAACTCGATCCTGGGATTTTCTGGAATCAGATTTGGGAATGAAGCCTCGTGCCACTCTCACACATCTACACTCATCAACTGATATCATTGTTGCTGTGATAGACACAGGGATATGGCCAGAGTCCCCAAGTTTCAGAGATGAGGGTATAGGGGAGATTCCTTCAAGGTGGAAAGGAATTTGTATGGAAGGTCATGATTTCAAGAAATCCAACTGCAATAGAAAATTGATAGGTGCAAGGTTCTATAATTTTCAAGCTACATCAGGTGGCAACCAGACTCGTATTGAAGGAGCCAAGGGCTCCCCAAGGGATTCTGTTGGACATGGAACTCACACTGCATCAATAGCTGCTGGTGCTCATGTCAACAATGCTAGTTATTATGGCTTAGCACAAGGAACAGCAAGAGGTGGCTCACCTTCTACTAGGATTGCTGCCTATAAAACATGCTCAGAAGAAGGTTGCTCTGGTGCCACCATACTAAAGGCAATTGATGATGCTATAAGGGATGGAGTAGATATCATCTCAATCTCAATTGGACTTAGCTCATTATTCCAATCGGACTTTTTGAATGATCCCATAGCCATTGGAGCATTTCATGCAGAACAAATGGGGGTCTTGGTGGTGTGTTCAGCTGGTAATGATGGTCCTGATCCTTACACAGTTGTGAACACTGCACCATGGATATTTACAGTTGCAGCTTCTAATATTGATAGGAACTACCAATCAACTCTAGTCCTTGGAAATGGGAAAACTTTCCGAGGTACAGGCATTAACTTCTCAAACCTTACTCGTTCCAAGATGTATCATCTTGTCTTTGGAGAGGAAGTTGCTGCCAAATTTGCCCCTGCATCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAATTGCAGGCAACATTGTTGTTTGTGTTAATGATGACCCCACTATTTCAAGGCGAATCAAGAAGCTAGTCTTACAAGATGCTAGAGCCATGGGGATGATACTCATTGACGAAGACAACAGAGATGTTTCCTTTGATGCAGGTACATTTCCCTTCACAGAGGTTGGCAATCTTGAAGGGCATCAGATCCTTGAGTACATAAACACTACCAAGAAACCAACTGCAACAATTCTTCCAACAATAGAAGTCAATAGATATAAGCCTTCTCCAATTGTTGCATCTTTCTCGTCTAGAGGTCCTTCAAGCCTTACGGAGAACATTCTCAAGCCGGATGTCATCGCTCCAGGAACTGGTATTTTGGCTGCCATGATTCCTAAAAGTAATGAACCGGGAAGTGTTCCACTTGGGAAAAAACCATCCTTGTTTGGCATAAAATCTGGAACATCTATGGCTTGCCCACATGTGACAGGTGCTGCAGCATTCATTAAATCAGTGCATAAAGAATGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAAACTACAACAATTTGAAGAAGCCTGTTACTAACAGTTCAAACTACTTTGCCAATCCACATGAAATGGGAGTTGGGCAGATTAATCCACTCAGAGCTCTCAACCCTGGTTTAGTCTTTGAAACAAATGCTGAAGACTATATCAGATTCCTTTGTTACTATGGCTATTCAAAGAAAAACATAAGGTCAATGTCTAAGACTAACTTTAATTGCCCAAGGAACTCTTCTGAAGACCTTATCCCCAACATTAATTACCCATCAATATCCATAAAAGCACTTAGACAACCAAAAGCAATAGTAATCACAAGAACACTTACCAATGTTGGACACCTTAATGCCACATACACTGCAAAGGTGCGTGCACCTGAGGGATTGCTTGTCAATGTCATCCCCAATAAACTATTGTTTTCTGAGGGTGTGCAGAAAATTACCTATAAAGTTTCATTCAATGCCAAGGATGCCCGTGGTGGATACAATTTTGGGACTCTAACATGGCTTGATGGTCAACATTATGTTCATACAGTTTTTGCAGTCAAAATTGAATAA 2322 0.4156 MEWLLQFLHLLFIASLLICSTAISDQIPKPYVVYMGNSSPNNIGVEGQIPESTHLQLLSSIIPRKESERIALIHHFNHAFSGFSAMLTESEASALSGHPGVVSVFPDPVLEMHTTRSWDFLESDLGMKPRATLTHLHSSTDIIVAVIDTGIWPESPSFRDEGIGEIPSRWKGICMEGHDFKKSNCNRKLIGARFYNFQATSGGNQTRIEGAKGSPRDSVGHGTHTASIAAGAHVNNASYYGLAQGTARGGSPSTRIAAYKTCSEEGCSGATILKAIDDAIRDGVDIISISIGLSSLFQSDFLNDPIAIGAFHAEQMGVLVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNYQSTLVLGNGKTFRGTGINFSNLTRSKMYHLVFGEEVAAKFAPASEARNCYPGSLDYNKIAGNIVVCVNDDPTISRRIKKLVLQDARAMGMILIDEDNRDVSFDAGTFPFTEVGNLEGHQILEYINTTKKPTATILPTIEVNRYKPSPIVASFSSRGPSSLTENILKPDVIAPGTGILAAMIPKSNEPGSVPLGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHKEWSPSMIKSALMTTATNYNNLKKPVTNSSNYFANPHEMGVGQINPLRALNPGLVFETNAEDYIRFLCYYGYSKKNIRSMSKTNFNCPRNSSEDLIPNINYPSISIKALRQPKAIVITRTLTNVGHLNATYTAKVRAPEGLLVNVIPNKLLFSEGVQKITYKVSFNAKDARGGYNFGTLTWLDGQHYVHTVFAVKIE* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0879 773 Pfam Fibronectin type-III domain 674 770 IPR041469 -
Apr5g0879 773 SUPERFAMILY Subtilisin-like 113 630 IPR036852 GO:0004252|GO:0006508
Apr5g0879 773 Gene3D - 643 772 - -
Apr5g0879 773 ProSiteProfiles Serine proteases, subtilase domain profile. 117 626 - -
Apr5g0879 773 CDD Peptidases_S8_3 110 593 IPR034197 -
Apr5g0879 773 Gene3D - 350 494 - -
Apr5g0879 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Apr5g0879 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Apr5g0879 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Apr5g0879 773 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Apr5g0879 773 Pfam Subtilase family 140 596 IPR000209 GO:0006508|GO:0008236
Apr5g0879 773 CDD PA_subtilisin_like 356 487 - -
Apr5g0879 773 Gene3D Peptidase S8/S53 domain 141 639 IPR036852 GO:0004252|GO:0006508
Apr5g0879 773 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 66 769 - -
Apr5g0879 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 66 769 IPR045051 -
Apr5g0879 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Apr5g0879 773 Pfam Peptidase inhibitor I9 31 112 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0879 Apr-Chr5 12879160 12888643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0879 31 770 Subtilisin-like Serine Gene Family AT1G20150 42.539 0.0 600