Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0877 ATGGAAGAGGAGAATGTTAAACAACCATTGTTGGAGAATAAGTACCATAAGGACTGCCCTGGTTGTAAGGTGGATCAAGCCAAAGAGCTGAGTCAAGGACAGGGTGTACCCATTAAAAATCTTTTGATCATATGGATGGTGGTGTTATGTGCTGCACTGCCTATATCATCTCTCTTTCCGTTCCTTTACTTTATGGTAAGGGATTTGCATATTGCAAAGACAGAAGCTGATGTTAGTTCTTATGCTGGTTATGTGGGATCCGCATACATGTTTGGCAGATGTTTGACATCTGTATTGTGGGGAATTATAGCTGATCGCTATGGTCGAAAGCCTGTTCTAGTTATAGGGGTCATCACAGTTGTCATTTTCAACACACTATTTGGCCTTAGCACAACTTTTTGGATGGCTTTGACCATGAGATTTCTTTTGGGAAGTTTAAATGGTTTGCTTGGACCAGTGAAGGCCTATGCTACTGAACTTTTTCGGGAAGAACACCAAGCTCTAGGACTCTCAACTGTCAGTGCAGCTTGGGGCATAGGTTTAATCATTGGCCCAGCACTGGGGGGCTATCTGGCTCAGCCAGTAGAGAAATACCCTCATATATTTCCAAAAAATTCCTTTTGGGATAAGTTTCCATACTTCTTGCCCTGCTTTGCAATATCAGCAGTTTCATTTGTAGTCTCTATTTTCTGTATATGGATTCCAGAAACACTTCACAACCACGGAAATGAATCAAAAGATGATGCTGAAGCTATAGAGAATGGAAGCAGTAAGGCTGACAGAGACGAGAAAATCCAAAAGAACGAAAACCTCCTCCTGAACTGGCCATTAATGTCATCTGTCATTGTTTATTCTGTTTTCTCACTTCATGATATTGCTTATCAAGAGATTTTCTCATTATGGGCTGTCAGTTCTCCAAGGCTAGGGGGTTTGAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTTTTGCACTTATCATCTACCAACTTTCCTTATACCCATCTGTGGAAAAAATATTTGGACCTATTCATATTGCCCGCATCTCGGGGATATTATCTCTACCACTTTTGCAAAGTTACCCCTTCATAGCATTGTTGTCTGGCTTAGCACTATTCATAGTGATAAGTATTGCCTCAATTCTGAAGAATATTTTGTCTCTGACCATTATAACTGGTTTGTTCCTTATACAAAACCGAGCTGTGGAACAACACCAAAGGGGGGCAGCTAATGGCATTTCTATGACAGGCATGTCACTATTCAAAGCTATTGGCCCTGCTGCTGCTGGTGCAGTATTAACTTGGTCACAGAAACGGATGGATGCTTCATTCCTCCCAGGCACCCACATGGTCTTCTTAGCACTGAACTTGGTTGAAGGACTTGGAATACTAATGATGTTCAAACCATTCCTTGGTGAAAAGAAGGAAACACATTCAAGTCAGATATAA 1458 0.4102 MEEENVKQPLLENKYHKDCPGCKVDQAKELSQGQGVPIKNLLIIWMVVLCAALPISSLFPFLYFMVRDLHIAKTEADVSSYAGYVGSAYMFGRCLTSVLWGIIADRYGRKPVLVIGVITVVIFNTLFGLSTTFWMALTMRFLLGSLNGLLGPVKAYATELFREEHQALGLSTVSAAWGIGLIIGPALGGYLAQPVEKYPHIFPKNSFWDKFPYFLPCFAISAVSFVVSIFCIWIPETLHNHGNESKDDAEAIENGSSKADRDEKIQKNENLLLNWPLMSSVIVYSVFSLHDIAYQEIFSLWAVSSPRLGGLNFTTDDVGNVLSISGFALIIYQLSLYPSVEKIFGPIHIARISGILSLPLLQSYPFIALLSGLALFIVISIASILKNILSLTIITGLFLIQNRAVEQHQRGAANGISMTGMSLFKAIGPAAAGAVLTWSQKRMDASFLPGTHMVFLALNLVEGLGILMMFKPFLGEKKETHSSQI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0877 485 SUPERFAMILY MFS general substrate transporter 39 476 IPR036259 -
Apr5g0877 485 CDD MFS_SLC46_TetA_like 44 471 - -
Apr5g0877 485 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 1 483 - -
Apr5g0877 485 PRINTS Tetracycline resistance protein signature 113 137 IPR001958 GO:0022857
Apr5g0877 485 PRINTS Tetracycline resistance protein signature 170 192 IPR001958 GO:0022857
Apr5g0877 485 PRINTS Tetracycline resistance protein signature 342 362 IPR001958 GO:0022857
Apr5g0877 485 ProSiteProfiles Major facilitator superfamily (MFS) profile. 40 477 IPR020846 GO:0022857
Apr5g0877 485 Gene3D MFS general substrate transporter like domains 38 461 IPR036259 -
Apr5g0877 485 PANTHER MAJOR FACILITATOR SUPERFAMILY-RELATED 1 483 - -
Apr5g0877 485 Pfam Major Facilitator Superfamily 44 383 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0877 Apr-Chr5 12860929 12867207 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0948 2 15484098 15494849 Apr5g0877 5 12860929 12867207 PCT