Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0876 ATGCCTGAACAAAATCATGCCATTCCTCTTCTTACTCCTTACACGATGGGAAACTTCAGTCTTTCCCATAGAATCGTTTTGGCACCACTGTTTAGAGCAAGATCTTACAATAATGTTCCTCAGCCCCATGCTGCCATATATTACTCTCAAAGAGCTAGCAAGGGAGGTCTTTTGATAGCTGAAGCTAATTCTATTTCACCCACTTCTCAAAACCATCCAAACACACCTGGGATATGGTCAAGAGAGCAAATCGAAGCATGGAAACCTGTTGTGGATGCTGTTCATGCCAAAGGTGGTATATTCTTCTGTCAGATTTGTCATGTTGGAAGGGTTTCAGATCCAGATTTTAAGCCAAATGGGCAAGCTCCAATATCATCAACTAACAAGCCACTGGCACAAGATGGTAATGACCTGAAACCAAGGCAGCTAAGAACAGATGAAATTCCTCATATTGTCAATGACTTCAGACTTGCTGCAAGGAATGCTATGGAAGCAGGCTTTGATGGAGTTGAGATCCATGGGGCACATGGTTTTCTAATTGACCAATTTTTGAAAGATCAAGTTAACAACAGAACAGACAAATATGGTGGGTCTCTAGAGAATCGTTGCCGCTTTGCACTAGAAGTTGTTGAAGCTGTTGTTCAAGAAATAGGGGCAGATAGAGTTGGAATGAGACTATCACCTTTTTCAGACTACAATGAATGTGTTGATTCTAACCCTGAAGCTTTGGGCCTCTACATGGTCAAATCTCTTAACAAACATGGTGTTCTTTATTGCCACATGGTTGAGCCAAGATGGGACATATCTGGAGAAAATAAAGAAAGCCCTTATAGCCTTGTACCAATGAAGAAGGCTTTTAGTGGCACTTTTATTGTTGCTGGGGGTTATGATAGAGAAGAAGGCAACAGGGCTGTGATTGAGAACAGGACAAATCTTGTTGCATATGGTCGTTTGTTTTTGGCTAATCCAGATTTGCCTAAGAGATTTGAGCTTGATGCACCACTAAACAAGCACAATAGGGACACTTTCTACACTTCTGATCCAGTTATAGGTTATACTGACTACCCCTTTCTTGAAAGCATTGTTTAA 1089 0.4114 MPEQNHAIPLLTPYTMGNFSLSHRIVLAPLFRARSYNNVPQPHAAIYYSQRASKGGLLIAEANSISPTSQNHPNTPGIWSREQIEAWKPVVDAVHAKGGIFFCQICHVGRVSDPDFKPNGQAPISSTNKPLAQDGNDLKPRQLRTDEIPHIVNDFRLAARNAMEAGFDGVEIHGAHGFLIDQFLKDQVNNRTDKYGGSLENRCRFALEVVEAVVQEIGADRVGMRLSPFSDYNECVDSNPEALGLYMVKSLNKHGVLYCHMVEPRWDISGENKESPYSLVPMKKAFSGTFIVAGGYDREEGNRAVIENRTNLVAYGRLFLANPDLPKRFELDAPLNKHNRDTFYTSDPVIGYTDYPFLESIV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0876 362 MobiDBLite consensus disorder prediction 119 133 - -
Apr5g0876 362 Gene3D Aldolase class I 2 362 IPR013785 -
Apr5g0876 362 Pfam NADH:flavin oxidoreductase / NADH oxidase family 10 334 IPR001155 GO:0010181|GO:0016491
Apr5g0876 362 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 7 360 - -
Apr5g0876 362 PANTHER NADH OXIDOREDUCTASE-RELATED 7 360 IPR045247 GO:0010181|GO:0016491
Apr5g0876 362 MobiDBLite consensus disorder prediction 117 140 - -
Apr5g0876 362 CDD OYE_like_FMN 9 340 - -
Apr5g0876 362 SUPERFAMILY FMN-linked oxidoreductases 9 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0876 Apr-Chr5 12853552 12856168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0876 3 360 Acyl Lipid Metabolism Gene Families AT1G76690 69.399 0.0 540