Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0872 ATGTCTTCTAGTGAAGAAATCCAAAATTTCAGAGTTTTTGCAGCAACATGGAATGTAGGAGGGCAATGCCCCACTGGGAACCTTGATCTGAATGATTTTCTTCAGGTTCGAAATGAGCCAGATATGTATGTTTTGGGATTTCAAGAGATTGTCCCTTTAAATGCTGGGAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCAAAATGGCTTGCCTTAATCAACCAATCACTTAATGGTCCTTCAGATTTGGCTCCTAAAGAACTAAAACCGACTGCATCCTTTGGCGGCTCACTGTTCTTCCAAAAGCCTTCTTTAAAGAAGATTAAGAAAACTTTCAAGAAAGTAAATGGAAAGAGGCTAAAAAGTTGTAACTGTGTTCTTGAAATGGAAAGAAAAGCTGCTAATAAAGATTTTTGTTTTCGCTGCCAAGAATCGAACTTCAATTCAGATGATTCTTCCACTGAAGAGGAGGATGACAGTTTCCCAATTCCTGTTGCATTGGCTACTAACCAGATGAAATACAGTCTTGTTGCAAGTAAGCAAATGGTTGGAATTTTTGTATGTGTCTGGATGAGAAAGGAGCTTGTTCAGTATGTAGGCCATTTGAGAATTTGTTGCACTAGCCGCGGGATCATGGGTTGCCTAGGGAACAAGGGATGCATATCTGTGAGCATGTCATTTCATCAGACAAGCTTTTGCTTTATCTGCAGTCATTTGGCATCTGGAGAGAAAGAGGGTGACGAGCTGCGCAGGAATCTTGATGTCATAGAGATTCTAAAGAACACTCAGTTTCCAAGGATTTGCAAGACATCATATAGTAGGATGCCTGACAAAATTTTAGACCACGACCGAATCATATGGTTTGGGGACTTGAATTACAGAATTTCTTTGAGCTATGATGATGCAAAAAGGCTAGTTGAAAAGAAGGACTGGCCTGCTCTATTTAACAAGGATCAGCTTAAAATGGAGAGGGAAGCAGGTCGTGTATTTAAGGGGTGGAAAGAGGGGAAGATCTCCTTTGCACCTACTTATAAATATGCCTTCAACTCAGACACTTACTATGTTGAAGGTGTCAAAGTTTCAAAGAACAAAAGGAGAACTCCAGCTTGGTGTGATAGAATCTTGTGGCATGGAAGAGGAATAAATCAAATTTCATACGTCCGTAAAGAATTTAAGTTTTCCGACCATCGACCTGTGTGTGCAACATTTATGGTAGATGTTGAGGTTCTGTGCAGGGGACAAAAGAAGAAGGTTTCCAATTACAACTTTCAGAATATTGATGATCTTGTATCCACAAGAAGTTCATATTTTTCTTGA 1320 0.3985 MSSSEEIQNFRVFAATWNVGGQCPTGNLDLNDFLQVRNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINQSLNGPSDLAPKELKPTASFGGSLFFQKPSLKKIKKTFKKVNGKRLKSCNCVLEMERKAANKDFCFRCQESNFNSDDSSTEEEDDSFPIPVALATNQMKYSLVASKQMVGIFVCVWMRKELVQYVGHLRICCTSRGIMGCLGNKGCISVSMSFHQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTSYSRMPDKILDHDRIIWFGDLNYRISLSYDDAKRLVEKKDWPALFNKDQLKMEREAGRVFKGWKEGKISFAPTYKYAFNSDTYYVEGVKVSKNKRRTPAWCDRILWHGRGINQISYVRKEFKFSDHRPVCATFMVDVEVLCRGQKKKVSNYNFQNIDDLVSTRSSYFS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0872 439 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 4 421 IPR045849 GO:0004445|GO:0046855
Apr5g0872 439 Pfam Endonuclease/Exonuclease/phosphatase family 15 397 IPR005135 GO:0003824
Apr5g0872 439 SUPERFAMILY DNase I-like 6 431 IPR036691 -
Apr5g0872 439 Gene3D Endonuclease/exonuclease/phosphatase 1 438 IPR036691 -
Apr5g0872 439 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 10 4 421 - -
Apr5g0872 439 SMART i5p_5 8 412 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0872 Apr-Chr5 12798692 12803356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0872 175 418 Acyl Lipid Metabolism Gene Families AT2G43900 28.269 6.51e-30 121