Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0868 ATGGGGATCCAGACTATGGGATCTCAGGGTGGTGGAGATAGTAATGGAAAACTGTCACAATTTCAGCCTCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTCGATGAGGTTCAGAATCAGTTAGGTGATTTAGGGAAGCCACTTAGTAGCATGAACCTTGATGAGCTTCTAAAAAATGTATGGACCGTTGAGGCTAGCCAGTCCATTGATGTGGACAATGACGGCACAGCACACACTAGTCAAGCTGCACTGCAGCGTCAGGCTAGTCTGTCATTAACTGGTGCACTAAGCAAGAAGACTGTAGATGAGGTTTGGAGAGATATCCAACAAAACAAAACCAATGAGGAGAAGAAGTTCCGAGACAGACAACCTACTTTGGGAGAAATGACATTGGAGGACTTTTTGGTGAAAGCAGGTGTTATTTCAGAAGCATCATCTAATAGAAAGAATATTGGTACTATAGCTGGGGTCAATTCGAACATCGCAGCACCACAGTTTCCTGCGCAAGGTCAGTGGATACAGTATCCACAAGCACAATATCAGCATCCACAACAGAGTTTAATGGGGATATACATGCCTAGCCAGGGTTTGGCACAGCCATTACACATGGGTGCTGGTGCTTCGTTGGATGTTTCATTTGCTGATAGTCAAGTGGCATTGCCTTCACCTCTGATGGGAGCGGTGTCAGATGCACAGACACCTGGAAGAAAAAGAAGCACTCCGGAGGACATGATGGAGAAGACTGTTGAGAGGAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCTCGTTCAAGGGCAAGGAAACAGGCTTACACAAATGAACTGGAGAATAAAGTTTCGCGTCTAGAAGAGGAAAATGAAAGGCTGAGGAAACGAAAGGAGCTGGAGAAGATGTTGCCATGTGCACCACCTCCTGAACCAAAATATCAACTTCGCCGAAATGCGTCAGCTCCATTCTGA 969 0.4603 MGIQTMGSQGGGDSNGKLSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEASQSIDVDNDGTAHTSQAALQRQASLSLTGALSKKTVDEVWRDIQQNKTNEEKKFRDRQPTLGEMTLEDFLVKAGVISEASSNRKNIGTIAGVNSNIAAPQFPAQGQWIQYPQAQYQHPQQSLMGIYMPSQGLAQPLHMGAGASLDVSFADSQVALPSPLMGAVSDAQTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPCAPPPEPKYQLRRNASAPF* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0868 322 CDD bZIP_plant_BZIP46 252 306 - -
Apr5g0868 322 PANTHER BZIP TRANSCRIPTION FACTOR 3 319 - -
Apr5g0868 322 MobiDBLite consensus disorder prediction 237 302 - -
Apr5g0868 322 Gene3D - 250 303 - -
Apr5g0868 322 SMART brlzneu 248 316 IPR004827 GO:0003700|GO:0006355
Apr5g0868 322 Coils Coil 268 302 - -
Apr5g0868 322 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 255 270 IPR004827 GO:0003700|GO:0006355
Apr5g0868 322 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 319 IPR043452 GO:0003700|GO:0045893
Apr5g0868 322 Pfam bZIP transcription factor 252 298 IPR004827 GO:0003700|GO:0006355
Apr5g0868 322 SUPERFAMILY Leucine zipper domain 252 297 IPR046347 GO:0003700|GO:0006355
Apr5g0868 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 295 IPR004827 GO:0003700|GO:0006355
Apr5g0868 322 MobiDBLite consensus disorder prediction 1 21 - -
Apr5g0868 322 MobiDBLite consensus disorder prediction 226 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0868 Apr-Chr5 12757600 12761956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0868 22 322 bZIP Transcription Factor Family AT3G56850 56.209 2.61e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g0868 bZIP_1 1.3e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0954 2 15615024 15618531 Apr5g0868 5 12757600 12761956 PCT