Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0866 ATGGGGTGGTTGTCGTTGCTATTTCAAATTATTTTATGCTTACAATATTTGCTCTTTGATTTTCCAGCTTTTTCTTCTTCCCAATTCATATGTCATCCTGACCAAAGCTCTGCATTACTTCAATTTAAAAACTCTTTAGTTACTAATACTATTTATGCTTGTGATGAATCTCTGAAGATTGCAACATGGAAAAACGGAACTGATTGTTGCTCATGGCTTGGAGTCACATGCAACACTCTCTCTGGTCATGTTATTGGCCTAAACCTCAGTTGTGAAGGACTCCAAGGTATAATCCATTCTAATAGTACCCTTTTCCATCTTTCTCATCTCCAAACACTTAATCTTTCTTTTAATGTTCTTTCCCAGTTCCAATTTCCGTCTCAGTTTGGTGGGATGTTTATGAGTCTCAAACATCTTGACTTGTCTTATTCTTACATCAGAGGTGAAATTCCTTCTGAAATTTCACAGCTTTCCAAGTTAGTCTCACTTAATCTCACTTGGAATTTTGAATTAAAATGGAAAGAAACCACTTTGAAGAGTCTTCTACAAAATGCAACAAATTTAAGGGAACTTCTTTTGGATAATACAAATATGTCTTCAATAAGGCCAAGCTCAATGCCTCTGCTACTAAATTTATCTTCCTCTTTGGTTACTCTTAATCTAAGATCAGTTGGGTTAAGTGGAAGCTTGACAAATGAGATTATTTGTTTACCAAATCTTCGACAACTATATCTAACAAATAATTTCAACCTTGGAGGCCATCTTCCTATGTTGAGTTGCAGCAATGCTCTCAATATCATGGATCTTTCAGGATGTAAATTCCAAGGACCGTTTCCTGTGTTTTTCTCTAACCTCTCACATCTTACTTACCTGAGTCTCTCAAGTAACATCCTCAATTGTTCAATTCCACCCTCACTTTTAACCCTTCCAAGTTTATCCTTCTTGTATCTAAAACATAGTAATCTCAATGGCCATCTCCCAAATGTCTTTCATCAGTCAAACAAATTTCAAGAATTAGATTTGAGTGAAAACAATATAGAAGGTGAGTTGCCATCATCACTTTTGAACCTTCAACATCTCATTCGTTTGGATGTTTCAGGAAATCAACTTAATGGTTTAATTCCATCATCACTTTCAAATCTTCTTACTTTCTTGAACCTTTCATTGAACCGTTTCAGTGGTTTGATCCCATCATCACTTTCACATCTTCAACAACTCATTTACTTGGATCTTTCACATAACACATTTAGTGGTCAAATCCCAAATGTGTTTGGTGGACTAAACAAATTGAAATCTCTTGATCTTAGTTTCAACAATTTAGGAGGACAAATTCCATCTTCATGGTTTGACTTGACTCAACTTTCTTACTTGGATTGTTCTAATAACAGATTAGAGGGTCCTTTGCCTAATAAAATTACAAGGTTTCCAAACCTAACCGACTTGCGCTTAAATAACAACTTGCTAAATGGGACAATTCCTTCATGGTGTTTATCTTTACCATCTTTGGTAAATTTGTATCTATCATATAATCAATTTGAAGGGCATGTAAGTGCAATGTCATCACATTCCTTGGAGAATCTATATTTGTGTAGTAACAAGTTACAAGGTAATATTCCAGAATCAATTTTCAACCTTGTAAACCTTAAATACTTGTGTCTATTTTCAAACAATTGGAGTGGTACTATCAATTTCCAACTCTTCTCCAAGTTTCAAAATCTGGAAGTTCTTTCCCTTTCACAGAATAGTCAATTATCACTAAACTTTGAATCCAATGTCACTTACAGTTTCTCTCATTTAAAAGCTCTGGAATTATCTTCTATCAATTTGACTGAATTTCCCATATCATTTGAAAAATTTCCAAGTTTGAGTTATATTGATTTGTCCTACAATAAACTTGATGGAAGGTCACCCAATTGGTTACTACATGAAATGGATTCATTAAGTTTTTTGAACCTCTCTAACAACTTGTTGACATCAATGGACCAACTGCCAAGGAATTATGGGTTCAGTTACCTTGATCTTAGTTTCAACTTATTGGCTGGTGACATCTCTTCACTAATTTGCAATGCAACTTCACTTGTGATTCTCAATTTGTCACACAACAAGTTGGCTAGCATTATTCCTCAATGCCTTGTAAACTTATCATCCCTTCGAGTTCTAGATCTACAAATGAACAAACTTTTTGGCCCTTTGCCAAGAACCTGTTCGAAGAACAACCAGCTCAGTACTTTGAATCTCAATGGGAACAAATTAGAAGGTCTTTTGCCTAAATCTTTGTCCAACTGCACACAATTGGAGCTTCTAAATCTTGGCAACAACCAAATAAAGGGTGAATTTCCGCATTGGCTTCAAACTTTACCACATTTGAAAGTGTTGATTTTGCGAGCCAATAAATTGCATGGTTCTATTGCTAGTTTAGAGATCAAGGATATGTTTCCTAGTTTAATCATTTTTGATGTATCATGCAATAACCTCAGTGGCCCAATACCAAAAGGCTACATAAAAAATTTCAAAGCCATGAAGAATGTGCTTCAAGTTGAAGGGCACAGCAATTTGCAATACATGTGGGCAGGATTAGGTGTTGATGCAAGTCAAACAAAAATTAACCTGTTCTATGATTCTGTGAATATAACAACAAAAGGGATCACTGTCATGCTCACAAAAATTCCAACAGTCTTTGTATATATTGATTTATCAAGCAACAAATTTGAAGGAGAGATTCCAAATTATGTTGGAGAGCTTCATGCACTCATAGGGCTCAACCTTTCCCATAATAGACTGATTGGTTCTATTCCTCACTCAATGGGAAATTTGGTTAACTTGGAATCATTGGATCTATCCTCAAATATGCTTATTGGTGGCATTCCTACAGAACTAATCAATCTAAACTATCTTGCAGTTTTGAATCTTTCCCATAACCATCTTGTGGGAGAAATACCTCAAGGGAAGCAATTCAACACATTTTTAAATGATTCCTATGTGGGAAACTTGGGGTTATGTGGATTTCCATTGTCAATGAAATGTAGTAAGGGTCCTGCACAACACACTCAACATGAACAAAAAATTGAATTTGGCTGGAAACCAGTGGCTATAGGATATGGATGTGGCATGGTGTTTGGAGTGGGCTTGGGATGTTGTGTACTGTTAACAGGGAAGCCTCAATGGCTTGTAAGGATGGTCCAAGGTCACCAAAATAGAAGGCCTAAAAGGAGGACAAGGATGAGGACTCATGGAACAATGAATCAATAA 3249 0.3586 MGWLSLLFQIILCLQYLLFDFPAFSSSQFICHPDQSSALLQFKNSLVTNTIYACDESLKIATWKNGTDCCSWLGVTCNTLSGHVIGLNLSCEGLQGIIHSNSTLFHLSHLQTLNLSFNVLSQFQFPSQFGGMFMSLKHLDLSYSYIRGEIPSEISQLSKLVSLNLTWNFELKWKETTLKSLLQNATNLRELLLDNTNMSSIRPSSMPLLLNLSSSLVTLNLRSVGLSGSLTNEIICLPNLRQLYLTNNFNLGGHLPMLSCSNALNIMDLSGCKFQGPFPVFFSNLSHLTYLSLSSNILNCSIPPSLLTLPSLSFLYLKHSNLNGHLPNVFHQSNKFQELDLSENNIEGELPSSLLNLQHLIRLDVSGNQLNGLIPSSLSNLLTFLNLSLNRFSGLIPSSLSHLQQLIYLDLSHNTFSGQIPNVFGGLNKLKSLDLSFNNLGGQIPSSWFDLTQLSYLDCSNNRLEGPLPNKITRFPNLTDLRLNNNLLNGTIPSWCLSLPSLVNLYLSYNQFEGHVSAMSSHSLENLYLCSNKLQGNIPESIFNLVNLKYLCLFSNNWSGTINFQLFSKFQNLEVLSLSQNSQLSLNFESNVTYSFSHLKALELSSINLTEFPISFEKFPSLSYIDLSYNKLDGRSPNWLLHEMDSLSFLNLSNNLLTSMDQLPRNYGFSYLDLSFNLLAGDISSLICNATSLVILNLSHNKLASIIPQCLVNLSSLRVLDLQMNKLFGPLPRTCSKNNQLSTLNLNGNKLEGLLPKSLSNCTQLELLNLGNNQIKGEFPHWLQTLPHLKVLILRANKLHGSIASLEIKDMFPSLIIFDVSCNNLSGPIPKGYIKNFKAMKNVLQVEGHSNLQYMWAGLGVDASQTKINLFYDSVNITTKGITVMLTKIPTVFVYIDLSSNKFEGEIPNYVGELHALIGLNLSHNRLIGSIPHSMGNLVNLESLDLSSNMLIGGIPTELINLNYLAVLNLSHNHLVGEIPQGKQFNTFLNDSYVGNLGLCGFPLSMKCSKGPAQHTQHEQKIEFGWKPVAIGYGCGMVFGVGLGCCVLLTGKPQWLVRMVQGHQNRRPKRRTRMRTHGTMNQ* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0866 1082 SUPERFAMILY L domain-like 639 992 - -
Apr5g0866 1082 Pfam Leucine Rich Repeat 359 381 IPR001611 GO:0005515
Apr5g0866 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 23 382 - -
Apr5g0866 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 380 470 - -
Apr5g0866 1082 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 464 1037 - -
Apr5g0866 1082 ProSiteProfiles Leucine-rich repeat profile. 692 713 IPR001611 GO:0005515
Apr5g0866 1082 Pfam Leucine rich repeat 671 727 IPR001611 GO:0005515
Apr5g0866 1082 Pfam Leucine rich repeat 740 799 IPR001611 GO:0005515
Apr5g0866 1082 Pfam Leucine rich repeat 382 440 IPR001611 GO:0005515
Apr5g0866 1082 Pfam Leucine rich repeat 896 951 IPR001611 GO:0005515
Apr5g0866 1082 Pfam Leucine rich repeat 264 322 IPR001611 GO:0005515
Apr5g0866 1082 MobiDBLite consensus disorder prediction 1063 1082 - -
Apr5g0866 1082 Gene3D Ribonuclease Inhibitor 125 470 IPR032675 -
Apr5g0866 1082 Gene3D Ribonuclease Inhibitor 564 1016 IPR032675 -
Apr5g0866 1082 Gene3D Ribonuclease Inhibitor 28 124 IPR032675 -
Apr5g0866 1082 SMART LRR_typ_2 644 666 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 740 761 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 619 642 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 427 451 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 403 426 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 691 713 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 786 814 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 357 380 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 107 131 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 522 545 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 714 738 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 475 499 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 938 962 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 914 937 IPR003591 -
Apr5g0866 1082 SMART LRR_typ_2 285 309 IPR003591 -
Apr5g0866 1082 Pfam Leucine rich repeat N-terminal domain 33 78 IPR013210 -
Apr5g0866 1082 Gene3D Ribonuclease Inhibitor 471 559 IPR032675 -
Apr5g0866 1082 ProSiteProfiles Leucine-rich repeat profile. 646 667 IPR001611 GO:0005515
Apr5g0866 1082 PRINTS Leucine-rich repeat signature 430 443 - -
Apr5g0866 1082 PRINTS Leucine-rich repeat signature 938 951 - -
Apr5g0866 1082 SMART LRR_sd22_2 938 964 - -
Apr5g0866 1082 SMART LRR_sd22_2 427 459 - -
Apr5g0866 1082 SMART LRR_sd22_2 285 300 - -
Apr5g0866 1082 SMART LRR_sd22_2 690 716 - -
Apr5g0866 1082 SMART LRR_sd22_2 357 383 - -
Apr5g0866 1082 SMART LRR_sd22_2 545 575 - -
Apr5g0866 1082 SUPERFAMILY RNI-like 338 659 - -
Apr5g0866 1082 SUPERFAMILY L domain-like 68 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0866 Apr-Chr5 12736415 12739895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0866 911 980 Receptor kinase-like Gene Family AT3G11010 44.286 5.21e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0866 5 12736415 12739895 Apr5g0866 5 12736415 12739895 ECH