Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0860 ATGGCCGGGAACTGCTTGCAGTCGGTGAAGCTCACCGGCAGCGGCCGTCCGGTGCTTGAATCGAACGAAATCGAATGCTTCTTCCTCTCCGGCGTGGACCTTCTCTGCGAAGACGATCCCAACACTAGCTTCCCTCACCTCAAATCCGGTCTCCTCATCCTCACCACGTGCCGCCTCCTCTGGCTGCCGGAATCCTCCGGAGGCTCCGCCTCCGCCGTGCCCCTCGCCGCAGTCTCCCACATTTTCTCTCACAAGAAGTCCCTCAGGTCCGTGTTCGCGTCCCCGCGGGTTCGGTTCCAGGTGTCCCTGTCGCCGGATGGTAGGATTTCAGCTTTGGGATCTCGATCGGTGGTGGCTACAATCGTGGTGCGCGGGAAGGGGGATTGCGATGCATTTTTGGCAAAATTTTGGGAAAATTGGCGCGCCAGGGCGTGGGAGGAGGCGGAGAGTGGTTCGAGTTCTGGTTCGAATGCAGCAACGGGGACGACGGTGGCATCGTCAAGCGGGATTTATTCGGGTGATGGGACAGTAAGGATGGTGGGAGTGTCGGGGATATTGAGGAAGGAGCAGGAAATGTGGGAGAGTACTGATAGGAGCTTGCAGGAGGCTTTTCAGGATTTGAATGCTCTAATGAGCAAGGCTAAAGAGATGGTGATGCTGGCAGAGAAAATGAGGTTAAAACTTTTGTCTGGTTCAAATTCTCAAACTAATGCAACTAATGATGATGATATGGGTTCCAAGGAAGAGATGCAAGATTGGTTATTGAGTGTTGGTATCATCTCCCCTGTTACAAAAGAGTCTGCAGGTGCTTTGTATCATCAACAGCTATCTCGTCAGTTGGCAGATTTTGTTAAAGTTCCACTTGAGAGAGCTGGGGGAATTATCAATCTTATTGATATTTATTGTCTCTTCAATCGTGCTCGTGGCACAGAATTGATCTCACCTGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTCCCAGTGGTTCTGCGAAAGTTTGATAGTGGAGTCATGGTAATACAGACTAAGTCTCACAGTGATGAGGAGGTTTTCACAAAAATCAAAATGCTTGTGATGAAGCCTGATGCTCTTCGAGCTGGCATAAGTGCTAGTGATGCTGCAAGGACACTGGGGGTTGCCCCAGCAATGGCAAAGGAGCATCTCTTGTCTGCTGAGAGCAAGGGTTTACTATGCAGAGATATAAGCCCTGATGGATTTCGATTTTATATTAACTTGTTCCCTGAAATTGATCGAGATGATATATCTTTAGTAAAAGATCAGGGAATTTATGCCTCGTGGGTATGGACTAATGGCTAA 1329 0.4936 MAGNCLQSVKLTGSGRPVLESNEIECFFLSGVDLLCEDDPNTSFPHLKSGLLILTTCRLLWLPESSGGSASAVPLAAVSHIFSHKKSLRSVFASPRVRFQVSLSPDGRISALGSRSVVATIVVRGKGDCDAFLAKFWENWRARAWEEAESGSSSGSNAATGTTVASSSGIYSGDGTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNSQTNATNDDDMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLERAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSGVMVIQTKSHSDEEVFTKIKMLVMKPDALRAGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYINLFPEIDRDDISLVKDQGIYASWVWTNG* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0860 442 Gene3D - 269 346 IPR036388 -
Apr5g0860 442 Pfam EAP30/Vps36 family 180 404 IPR040608 -
Apr5g0860 442 Gene3D - 195 268 - -
Apr5g0860 442 ProSiteProfiles GLUE domain profile. 9 152 IPR021648 GO:0032266|GO:0043130
Apr5g0860 442 SUPERFAMILY "Winged helix" DNA-binding domain 308 420 IPR036390 -
Apr5g0860 442 Gene3D - 348 419 IPR036388 -
Apr5g0860 442 SUPERFAMILY PH domain-like 5 120 - -
Apr5g0860 442 Gene3D - 8 152 IPR011993 -
Apr5g0860 442 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 6 423 IPR037855 GO:0000814|GO:0032509|GO:0043130
Apr5g0860 442 Pfam Vacuolar protein sorting protein 36 Vps36 11 101 IPR021648 GO:0032266|GO:0043130