Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0859 ATGGCACGCTTTCCCTTTGCGGAGAACCTGAGCCCGGGATTGTTAGGTGGCGCTGTTGCTCTTGTAGCCGTTGGCCTCACCGCTGCTTATTTTTGCCTTCGCATGAAAAACACCAAAGGATGCTTGGACCCCAAAAATTTCAAAGAATTTAAACTTATAAAGAAGACTCAGCTCAGCCACAACGTTGCAAGATTCAGATTCGCCCTTCCTACTCCTTCTTCGGTATTGGGCCTTCCAGTTGGAAAAAACATACTTGCTAGGGGGAAAGACAGCCAAGGAGAGGAAGTTATGAGATCATATACCCCAATCACATTGGATTCAGATATTGGCTACTTCGAATTGGTTGTGAAGATGTACCCAAATGGAAAGATGTCCCATCATTTTAGACAAATGAAAGAAGGTGATTACCTGGCCGTGAGGGGCCCTAAGGGACGTTTTAGCTACAAACCAGGCCAAGTTAGGGCATTTGGAATGCTTGCTGGAGGTTCAGGCATAACTCCAATGTTTCAGCTTATAAGAGCCATACTAGAAAACCCCAAAGACAAAACAAAGCTACACCTCATTTATGCTAATGTAACAGAAGATGACATTCTTTTAAAGGAAGAACTAGAAAACTTTGCGAACAAATTTCCTCACAGATTCGAAGTCTATCATGTTCTTAATAAGCCTCCTAATGAATGGAATGGTGGCGTTGGGTATGTGTCGAAGGAGATGATTAAATCCCATTGTCCATCACCATCCCCAGATATTCAGATACTAAGGTGCGGTCCACCACCAATGAATAAAGCCATGGCTGCTCACCTTGACGCACTGGGCTACACATCACAGATGCAGTTCGAGTTCTAA 846 0.4397 MARFPFAENLSPGLLGGAVALVAVGLTAAYFCLRMKNTKGCLDPKNFKEFKLIKKTQLSHNVARFRFALPTPSSVLGLPVGKNILARGKDSQGEEVMRSYTPITLDSDIGYFELVVKMYPNGKMSHHFRQMKEGDYLAVRGPKGRFSYKPGQVRAFGMLAGGSGITPMFQLIRAILENPKDKTKLHLIYANVTEDDILLKEELENFANKFPHRFEVYHVLNKPPNEWNGGVGYVSKEMIKSHCPSPSPDIQILRCGPPPMNKAMAAHLDALGYTSQMQFEF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0859 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491
Apr5g0859 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 12 281 IPR001834 GO:0016491
Apr5g0859 281 Gene3D Translation factors 40 138 - -
Apr5g0859 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 275 IPR039261 -
Apr5g0859 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 157 176 IPR001709 GO:0016491
Apr5g0859 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 195 206 IPR001709 GO:0016491
Apr5g0859 281 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 251 259 IPR001709 GO:0016491
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Apr5g0859 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Apr5g0859 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Apr5g0859 281 SUPERFAMILY Riboflavin synthase domain-like 40 150 IPR017938 -
Apr5g0859 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Apr5g0859 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 12 281 - -
Apr5g0859 281 CDD cyt_b5_reduct_like 50 281 - -
Apr5g0859 281 Gene3D - 139 281 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0859 Apr-Chr5 12609640 12616079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0859 30 281 NADPH P450 reductases AT5G17770 70.635 4.72e-141 396