Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0858 ATGGTGGTGTTGTCGAAAACAACAGCAGAACAGTACTCTTATTCGTATATTAGGAACTGCAAAGCAACGACATTCCCCACAGCAACAGGGATCCCTGTGGTGGACCTCTCCAAACCTGACGCAAAAAGCCTCATAGTGAAGGCTTGTGAGGAGTTCGGATTTTTCAAAGTCATAAACCATGGTGTTCCCATGGACGCTATCTCCAAGTTGGAGTCTGAAGCCGTCAACTTTTTCTCTCTGCCCCTCACACAGAAAGAAAAAGCTGGGCCTCCCAATCCATTTGGCTATGGAAACAAGAAAATTGGAGTAAATGGGGATGTTGGTTGGGTTGAATATCTTCTTCTCACCAACAACCAAGATTACAACTCCATCGCCCTCTCCCCTGCTTTTCCCCATAACCCAGACAACTTTCGGTGTGTGTTGAGCGATTATATGCGTGCTGTGAGGAATATGGGTTGTGAGATTCTTGAATTGATGGCTGAAGGATTGAACATTGAGGAAACGAAGGTGTTCAGCAAGCTTCTGATGGACAAAGATAGTGACTCTGTGTTCAGGCTCAATCATTACCCTCCTTGCCCTCTTGATAAGGGTTTGAATGACAATGATGAAAACGTTGTTGGGTTTGGTGAACACACAGATCCACAAATCATTTCCTTGTTGAGATCCAACAACACTTCTGGTCTCCAAATTTGTCTGAGAGACAAGAGTTGGATTTCAGTTCCACCCGACCACAGCTCCTTCTTCGTCAATGTCGGTGATTCCCTCCAGGTTATGACTAATGGACGGTTCAGGAGTGTGAGGCACAGGGTTATAGCAAATGGGTTCAAATCGAGGCTTTCAATGATTTATTTTGGTGGTCCACCTCTGAGTGAGAAAATAGCACCATTGCCTTCTCTTATGAAAGGAAAGGAAAGCTTATACAAAGAGTTTACATGGTTTGAGTACAAAAAATCAGCCTATGCTACAAGATTGGCAGATAACAGGCTTGGCAACTTCGAGAGAATTGCAGCTTCATAA 1017 0.4415 MVVLSKTTAEQYSYSYIRNCKATTFPTATGIPVVDLSKPDAKSLIVKACEEFGFFKVINHGVPMDAISKLESEAVNFFSLPLTQKEKAGPPNPFGYGNKKIGVNGDVGWVEYLLLTNNQDYNSIALSPAFPHNPDNFRCVLSDYMRAVRNMGCEILELMAEGLNIEETKVFSKLLMDKDSDSVFRLNHYPPCPLDKGLNDNDENVVGFGEHTDPQIISLLRSNNTSGLQICLRDKSWISVPPDHSSFFVNVGDSLQVMTNGRFRSVRHRVIANGFKSRLSMIYFGGPPLSEKIAPLPSLMKGKESLYKEFTWFEYKKSAYATRLADNRLGNFERIAAS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0858 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 31 113 IPR026992 -
Apr5g0858 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 12 334 - -
Apr5g0858 338 PRINTS Isopenicillin N synthase signature 45 62 - -
Apr5g0858 338 PRINTS Isopenicillin N synthase signature 211 232 - -
Apr5g0858 338 PRINTS Isopenicillin N synthase signature 247 273 - -
Apr5g0858 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 179 287 IPR005123 -
Apr5g0858 338 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 12 334 - -
Apr5g0858 338 Pfam 2OG-Fe(II) oxygenase superfamily 181 285 IPR044861 -
Apr5g0858 338 Gene3D - 3 326 IPR027443 -
Apr5g0858 338 SUPERFAMILY Clavaminate synthase-like 24 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0858 Apr-Chr5 12595983 12598016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0858 31 332 Glycosyltransferase AT5G59530 27.848 3.61e-27 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0858 5 12595983 12598016 Apr5g0858 5 12595983 12598016 ECH