Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0841 ATGGGCACTGATAGCCACGGGTACTCTCTGCTGAAGGATTTGAGATTAGAAATTGAAGTAAAGGATGGAACTTTCTCTCTCTACTTTTGGGTTTATTTGATGAGTTCAGCTACATTTCCTGCTACCATTATCCAACAGAGAATCAATATGCTACCAGTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATAAATTCCTGGGCTGACATTTCACATGCAACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTAGGCTGTGAGGTTTGTCCAGATTATATCCAGCTTAAGATTAACGGAAAGATTGTAGGAGAAAAGTCTCTGTCTTCCTTATTAAATAAGGAAGATGGTTCAAGTGATTTGAAGAAATTAACTTTGGCAAATGTTGGTGGAGATGGAAACTGTGTGCAGGGTTATGTGCACAAATTTGAAATATTGCCTATTGTTTCTTCTGTTAAGGAATTCCATTTAAAGGACCCTCCTCTGAAGTTATCAATTGATGAATCGTCTGCCTCTGATATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCATGTCGTAGGAACTTCTCTTTGGATGTTGTTCTTTCAGATGCCTTTGGACAGCCCGTAGATAAGGAGAATGAGCAGGTTTTTGCATCACTTCTGTATGCTGACACGGGGGCACCAGTGGAAAATACAACTGATGAGGAAGCACCCCTTTTAGCTAGCTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCAAGTAAACTTTTGTTGGGACGTGCTTCGTTTAAGCTCAAAATATCTCAGCTTTCATCAAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTGTGTTCCAACTCTAGGAAATTATCCTTTCCTTGAGACATACTCCCATCCAATTCGATGCATCTCCAGGAGCCGTAACACAAGATTGTCGACACTGGTGTGGAAAAGGTCAACTTCTGCTCTTAATCGCCTTAGTTTATCTCAATCTTCAGCTCTGGATGATGGATCATTGGAACTTCAGCATTCTGGTCATGAAGCAAAATCCAATCCACTCATGAAGCGGTTTAGACTTGGACAAGACAAAATATCTGTAACAGTGAAGGCTGACCCTACCATAGAGCAAACTGATGAGGAATGTAATTCTCATATCCGAACTGCTAGTCAGGTTGAGAATGGGTTTCCAACAAGCTTGGATGGAAGACCTGCAAACTTTTATGAAGCAGATGACTCTCCATCCGACTCAGAAAGCATAGGGGAGGGAATTTCAACTTTGAATAGCATGGAAAATAGAAGATATCCAATATCTGACATGACCATTTTCAAATACTGCTTGGCAAGCTTGTCTGAGAGATCTCTCATGCTTAAGGAAATTGCTACCTCTGCTTCGGACAATGAAATTTCAGAGTTGGCTCATCATGTATCGCTCTATTCTGGATGTTCACACCATGGAAACCAAATATTAATGGCCAAGAGATTGATAGAAGATGGAACCAATCTTTGGAAGTTGATGTCTCCAAACAACCACCACATTCCTTGGGAGAGTGCAGTCTACGAGATTGAAGTGCATTTCAAGAAGATTGCTTCTTGTGGCTTAAGATCTCTCTCACCTCAGGACCTAGAGCTTCTGAGAAGGATTGCAGGATGTCAAGAGTATATAACACCCGAGAACTTTGAGAGGTTGTGGTGCTGGTTGTACCCTGTAGCTTTTGTAATCTCTAGGAACTGGATAAATTCTATCTGGAAATCAACATCACCTAAGTGGATAGAAGGATTCATAACCAAGGAGGAGGCAGAAGCTTCACTTCAAGGTCCTACAGGTTTTCAAGACCCTGGTACCTTTATACTCCGGTTCCCCGCCTCCAGAAGCTGGCCCCATCCAGATGCAGGTAGCCTCGTTGTCACTTATGTTGGCAATGACTACAAACTTCACCACAGGCTACTTTCCATGGATCATATCTATAGCTCCAGTGATGGAATTGAGGTGAAACCACTGCAAGATATGCTAATGGCAGAACCAGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCATTAA 2079 0.4156 MGTDSHGYSLLKDLRLEIEVKDGTFSLYFWVYLMSSATFPATIIQQRINMLPVLLLHEEAPDTGNINSWADISHATVDFEFPLEKWVHVGCEVCPDYIQLKINGKIVGEKSLSSLLNKEDGSSDLKKLTLANVGGDGNCVQGYVHKFEILPIVSSVKEFHLKDPPLKLSIDESSASDIEEESDGVWSIVGGKASCRRNFSLDVVLSDAFGQPVDKENEQVFASLLYADTGAPVENTTDEEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRLFLIRFCVPTLGNYPFLETYSHPIRCISRSRNTRLSTLVWKRSTSALNRLSLSQSSALDDGSLELQHSGHEAKSNPLMKRFRLGQDKISVTVKADPTIEQTDEECNSHIRTASQVENGFPTSLDGRPANFYEADDSPSDSESIGEGISTLNSMENRRYPISDMTIFKYCLASLSERSLMLKEIATSASDNEISELAHHVSLYSGCSHHGNQILMAKRLIEDGTNLWKLMSPNNHHIPWESAVYEIEVHFKKIASCGLRSLSPQDLELLRRIAGCQEYITPENFERLWCWLYPVAFVISRNWINSIWKSTSPKWIEGFITKEEAEASLQGPTGFQDPGTFILRFPASRSWPHPDAGSLVVTYVGNDYKLHHRLLSMDHIYSSSDGIEVKPLQDMLMAEPELSRLGRIIRSH* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0841 692 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 7 689 - -
Apr5g0841 692 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 7 689 IPR001217 GO:0003700|GO:0006355|GO:0007165
Apr5g0841 692 Gene3D SH2 domain 581 690 IPR036860 -
Apr5g0841 692 SUPERFAMILY SH2 domain 591 657 IPR036860 -
Apr5g0841 692 ProSiteProfiles Src homology 2 (SH2) domain profile. 595 692 IPR000980 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Apr5g0841 None None None