Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0803 ATGAAGCAGCTTCCAACGCTGCTGATGAAGTCCCTTTCAGTTTATTCCTTACCACCTACCACATCCACCCTTCAACAAATTGCTTCCCATCAACCCAAAGGTGTTGCAAAGGTTGTACTGAAAAAGGGGAAGACACAACTCTTTAAGGATGGAAACCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGGAGGCCGCCTCCTAAGACTGGAGATATTGTTCTAGTAGCAGATGGGACTGAGAAACCAATTGGATGGGGCTTGTACAACTCAGTTTCTATGTTCTGTGTTCGGCTTATGCAGCTTGAAGATGAAGTTACCAGTGATTCATCTTGTGCATTGAGTATGGAGAAACTGCTGGAAACAAGAATTGATGCAGCAGTTGAATTGCGTAGAAGGTTGGGTCTTCCATCAGTCCATACAAATGCATATCGTCTAATCAATAGTGAGGGTGACAGATTATCTGGATTGATAATTGACGTCTTTGGAGATGTAGCTGTAGTAGCATCATCTGCTGCCTGGGTTGAGAAATACAAATCAGAGATAGAAGCTTGCATCAGGAAAATCAACTATATCAATCACATAAATTGGAGGCCATCTGTTGATATTTTAAAGGAAGATGGAGTTAATGTGTCTGATATGAAGAAAATGCACTCGTCTACATGTCCTGAAAGAACGAAGATTTTGGAAAATGGAATTGTATACGCAATTTCACTCAAGGGCCAGAAGACAGGATTCTATGCAGATCAGCGTGAGAATCGCCAGTTTATATCAAAAATTTCAGATGGTCAAAAGGTTCTTGATCTTTGTTGCTACAGTGGTGGTTTTTCTCTAAATGCTGTGCGTGGAGGTGCACTAAATGTCACTGGCATTGACACATCGCTGCCAGCTCTGGAGCTTGCTAAGGAAAATGTTATACTTAACAACATTGATCCTGGAAGAATTTCATTTTTGAGAGAAGATGCAACTGAATTTATGAAGGGTGCTCTCTTAAAAGATGAATCCTGGGATATTGTCATCATTGATCCTCCTAAACTGGCACCAACCAAAAAGGTTCTACACGGTGCATCTGGTATGTACAGAAATTTAAATTCGCTTGCGATGCAACTTACAAAAAGAGGTGGTCTTCTAATGACCTGTTCCTGCTCTGGAGCTGTGACCCAAAGTGGGATATTCCTGCGTATCCTTCAGGGTGCAGCATCTATGGCAGGTAGGAAAATCACCATTCTAAGACAGGCTGGTGCAGCTTATGATCATCCGATTGATCCAACATACCCGGAAGGCGCATACCTATCCAACATTCTATTAAGAGTTTCATAA 1323 0.4172 MKQLPTLLMKSLSVYSLPPTTSTLQQIASHQPKGVAKVVLKKGKTQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRLMQLEDEVTSDSSCALSMEKLLETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGDVAVVASSAAWVEKYKSEIEACIRKINYINHINWRPSVDILKEDGVNVSDMKKMHSSTCPERTKILENGIVYAISLKGQKTGFYADQRENRQFISKISDGQKVLDLCCYSGGFSLNAVRGGALNVTGIDTSLPALELAKENVILNNIDPGRISFLREDATEFMKGALLKDESWDIVIIDPPKLAPTKKVLHGASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFLRILQGAASMAGRKITILRQAGAAYDHPIDPTYPEGAYLSNILLRVS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0803 440 SMART pua_5 36 130 IPR002478 GO:0003723
Apr5g0803 440 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 21 439 - -
Apr5g0803 440 Gene3D Vaccinia Virus protein VP39 227 440 IPR029063 -
Apr5g0803 440 Pfam S-adenosylmethionine-dependent methyltransferase 223 396 IPR019614 GO:0008168
Apr5g0803 440 SUPERFAMILY PUA domain-like 37 105 IPR015947 -
Apr5g0803 440 CDD AdoMet_MTases 266 381 - -
Apr5g0803 440 CDD RlmI_M_like 120 209 - -
Apr5g0803 440 Gene3D PUA domain 35 107 IPR036974 GO:0003723
Apr5g0803 440 Gene3D RNA methyltransferase domain (HRMD) like 117 221 - -
Apr5g0803 440 Pfam PUA-like domain 38 101 IPR041532 -
Apr5g0803 440 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 435 IPR029063 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0803 5 11553144 11561494 Apr5g0803 5 11553144 11561494 ECH