Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0800 ATGGATACTATGACTGAAATGGGTTATTTCCCGGGAAGTCTCACTGAGGAAGAAATGAAGCAACTAGCAAGAAGTGAGAGGTTAGCAGTTAATGTGTCAAATGCAGCTAACATGGTGCTATTTGCAGCAAAGGTTTATGCTTCAATAAAGAGCAAATCCTTAGCAGTCATTGCTTCAACACTAGATTCTCTCTTGGATCTCTTGTCAGGATTTATATTATGGTTCACGGCCAATGCCATGAAAAGCCCAAACCATTATTATTACTATCCCATTGGAAAGAAACGGATGCAACCAGTGGGTATCATTGTTTTTGCATCAGTGATGGCAACCTTGGGATTGCAGATTCTGATAGAGTCTGCCCGACAACTGATTTCAAAGTCTATGCCTGAAATGGATCTTGATGACTTGAAATGGATGATTGGGATTATGGTATCTGTGACTGTTGTGAAGTTCATTCTCATGGTCTATTGTCCAAGGTTTGATAACGAAATTGTCAAAGCCTATGCACAAGATCATTTTTTTGATGTCATAACTAATTCAGTTGGATTAGCTGCTGCTGTGCTTGCTATCAAGTATAATTGGTGGATTGATCCTATGGGAGCTATTATTATAGCATTGTATACAATTAATACATGGGCAAAGACAGTGATTGAGAATGTATGGTCACTTATTGGGAGGACAGCACCACCTGATTTTTTAGCAAAGTTGACATATTTGATATGGAATCACCACGAAGAGGTTAAGCACATAGATACTGTCAGAGCATACACCTTCGGTGCTCATTACTTTGTTGAAGTTGATATTGTGTTGCCAGAGGACATGCCTCTTAATCAAGCACACAACATTGGTGAGACACTACAAGAGAAGCTTGAGCAACTTCCAGAAGTTGAAAGAGCCTTCGTGCACATTGATTTTGAGTTTACTCACAGGCCTGAACATAAGACGATGGGGTACGGTCGAGCAAGGGAAATGAGTGGTATTTTCTTAGATTTTGGGATTTGCCCTTCGCACCTACAGCTCATGAACCCATAG 1032 0.4031 MDTMTEMGYFPGSLTEEEMKQLARSERLAVNVSNAANMVLFAAKVYASIKSKSLAVIASTLDSLLDLLSGFILWFTANAMKSPNHYYYYPIGKKRMQPVGIIVFASVMATLGLQILIESARQLISKSMPEMDLDDLKWMIGIMVSVTVVKFILMVYCPRFDNEIVKAYAQDHFFDVITNSVGLAAAVLAIKYNWWIDPMGAIIIALYTINTWAKTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKTMGYGRAREMSGIFLDFGICPSHLQLMNP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0800 343 Pfam Dimerisation domain of Zinc Transporter 230 304 IPR027470 -
Apr5g0800 343 Gene3D Cation efflux protein, cytoplasmic domain 228 305 IPR036837 -
Apr5g0800 343 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 1 315 - -
Apr5g0800 343 Pfam Cation efflux family 34 223 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Apr5g0800 343 Gene3D Cation efflux protein transmembrane domain 28 223 IPR027469 -
Apr5g0800 343 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 228 304 IPR036837 -
Apr5g0800 343 SUPERFAMILY Cation efflux protein transmembrane domain-like 25 225 IPR027469 -
Apr5g0800 343 PANTHER METAL TOLERANCE PROTEIN 9 1 315 - -
Apr5g0800 343 TIGRFAM CDF: cation diffusion facilitator family transporter 31 304 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0800 Apr-Chr5 11518406 11521175 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0800 5 11518406 11521175 Apr5g0800 5 11518406 11521175 ECH