Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0799 ATGAATGATGAAAATAGAGGTAATTATCCATGTCTTATATGCAAGCAACACCGTAGAAGGCATGATCACAGTTGTATTTTTGGGCAATACTTTCCCATTAATAGGACTGTGGATTTTGAAAATGCTTCCATGCTTTTTGGTTTAAGCAACCTTTTGAGAATTATGCAAGATGTAGATCCACAAGACAGACAACATGCTGCAGATTCTATACTTAGAGAGGGCACTACATGGATAAATGATATACATCATGGTCCTCTTGGTTATGTATTGAATCTAAGGTCTCAAATACAGTCTTGTGAGAGGCAACTAGAAAATGTTAATAGATTGCTTGCATATTGTAGAGATCAAGCAAACTCAACTGTGCAAATGGGTATTTCCCCATTTGCTGGTTCATCTGCCTTTCATCTCCCACAGCAGAATACCCAACTTGGTGATTCTAGCATACAATTTCCAAACTTGGGTGGAACTGAGTTCTTTTCCAGTTCTCATGAGAAAGGAGAATCAAGTACTATTGCATCTAAAGAGAAAGAGGATGTTGATGAAGAAAAAGAGTCAATGGTCGACGACAAGGGAAAAAACATTACTTCTGATAAAGATGCGAATGTATAA 609 0.3727 MNDENRGNYPCLICKQHRRRHDHSCIFGQYFPINRTVDFENASMLFGLSNLLRIMQDVDPQDRQHAADSILREGTTWINDIHHGPLGYVLNLRSQIQSCERQLENVNRLLAYCRDQANSTVQMGISPFAGSSAFHLPQQNTQLGDSSIQFPNLGGTEFFSSSHEKGESSTIASKEKEDVDEEKESMVDDKGKNITSDKDANV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0799 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 8 188 - -
Apr5g0799 202 Coils Coil 89 109 - -
Apr5g0799 202 MobiDBLite consensus disorder prediction 154 202 - -
Apr5g0799 202 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Apr5g0799 202 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Apr5g0799 202 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 188 - -
Apr5g0799 202 MobiDBLite consensus disorder prediction 168 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0799 Apr-Chr5 11513586 11514407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0799 5 107 AS2 family AT3G27650 33.981 1.28e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr5g0799 LOB 5.1e-20 No_clan